Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.41□□□□□ -1.7
COL15A1P39059 AL671855.1-201ENST00000446875 1203 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 MTCO1P27-201ENST00000448269 226 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.41□□□□□ -1.7
COL15A1P39059 PABPC1P3-201ENST00000469174 459 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 AC087312.1-201ENST00000471411 480 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 AC084357.1-201ENST00000473404 255 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 S100A11P1-201ENST00000477525 312 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.41□□□□□ -1.7
COL15A1P39059 ARL2BPP4-201ENST00000506854 471 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL15A1P39059 AC005798.1-201ENST00000513715 387 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
COL15A1P39059 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
COL15A1P39059 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 MIR5004-201ENST00000579078 107 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 MIR4276-201ENST00000584832 70 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 AC005332.10-201ENST00000612725 619 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 AC068792.1-201ENST00000621354 417 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL15A1P39059 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL15A1P39059 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL15A1P39059 FAM35DP-201ENST00000323387 2712 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 DCAF13P1-201ENST00000495256 1330 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 OR11H5P-202ENST00000641612 1325 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 AC004944.1-201ENST00000517807 3059 ntBASIC4.41□□□□□ -1.7
COL15A1P39059 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
COL15A1P39059 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.41□□□□□ -1.7
COL15A1P39059 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL15A1P39059 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
COL15A1P39059 RNU6-1042P-201ENST00000384204 107 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 AL603766.1-201ENST00000407763 664 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 Y_RNA.619-201ENST00000410951 90 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.4□□□□□ -1.7
COL15A1P39059 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 RWDD4P2-201ENST00000426392 563 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 AL035410.1-201ENST00000427409 427 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 MUPP-201ENST00000438111 566 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 HSPE1P28-201ENST00000443139 211 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 MTND1P27-201ENST00000451117 902 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 ANP32BP2-201ENST00000454525 545 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 BX322784.1-201ENST00000455793 1077 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.4□□□□□ -1.7
COL15A1P39059 AC010625.1-201ENST00000511296 403 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 MTND4LP18-201ENST00000526864 291 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.4□□□□□ -1.7
COL15A1P39059 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.4□□□□□ -1.7
COL15A1P39059 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.4□□□□□ -1.7
COL15A1P39059 AC090186.1-201ENST00000605991 572 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.4□□□□□ -1.7
COL15A1P39059 AC244205.2-202ENST00000635781 342 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL15A1P39059 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.7
COL15A1P39059 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL15A1P39059 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL15A1P39059 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL15A1P39059 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.4□□□□□ -1.71
COL15A1P39059 RNA5SP432-201ENST00000362480 116 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 RNU5E-5P-201ENST00000365379 116 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 RN7SKP56-201ENST00000410513 331 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 RPL21P32-201ENST00000419877 477 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.4□□□□□ -1.71
COL15A1P39059 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.4□□□□□ -1.71
COL15A1P39059 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.4□□□□□ -1.71
COL15A1P39059 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AL592447.1-201ENST00000447592 540 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 USP9YP34-201ENST00000453983 808 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 SNRPFP4-201ENST00000456366 242 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 OR6K1P-201ENST00000456766 971 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 RPS27AP1-201ENST00000475545 471 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.4□□□□□ -1.71
COL15A1P39059 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.4□□□□□ -1.71
COL15A1P39059 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.4□□□□□ -1.71
COL15A1P39059 FCF1P8-201ENST00000510322 597 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 CDC42P4-201ENST00000510507 563 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 RN7SKP289-201ENST00000517244 295 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 IGHV3-32-201ENST00000519182 355 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AP003392.2-201ENST00000527269 208 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AL139174.1-201ENST00000531489 886 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.4□□□□□ -1.71
COL15A1P39059 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.4□□□□□ -1.71
COL15A1P39059 MTND1P15-201ENST00000579262 949 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AP001180.3-201ENST00000582221 145 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 MIR544B-201ENST00000582372 78 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AP000403.1-201ENST00000603349 851 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC007566.2-201ENST00000603642 413 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 SEPT7P9-203ENST00000604116 343 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC025588.3-201ENST00000604182 274 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC113194.1-201ENST00000606037 500 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC135507.2-201ENST00000612443 309 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms