Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ATP5F1P1-201ENST00000433775 569 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 USP9YP35-201ENST00000435696 412 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 LARP1BP3-201ENST00000437229 869 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 USP9YP29-201ENST00000445112 563 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.45□□□□□ -1.86
COL2A1P02458 HMGB1P48-201ENST00000446155 598 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 GTF2IP12-201ENST00000456547 356 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 CFTRP1-201ENST00000456646 183 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC008565.1-201ENST00000509046 885 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.45□□□□□ -1.86
COL2A1P02458 AP001317.1-201ENST00000531194 960 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.45□□□□□ -1.86
COL2A1P02458 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.45□□□□□ -1.86
COL2A1P02458 ZNF519P3-201ENST00000557158 1032 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC083760.1-201ENST00000589621 670 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 BMS1P7-201ENST00000602440 1052 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AC021749.1-201ENST00000604322 607 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 AC008443.7-201ENST00000622195 246 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 AL359740.1-201ENST00000624340 592 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
COL2A1P02458 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.45□□□□□ -1.86
COL2A1P02458 ELL2P4-201ENST00000446870 1376 ntBASIC3.45□□□□□ -1.86
COL2A1P02458 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL2A1P02458 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL2A1P02458 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 OR52B1P-201ENST00000316506 909 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 Y_RNA.6-201ENST00000362350 114 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 RNU6-236P-201ENST00000363886 106 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 Y_RNA.390-201ENST00000383932 102 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 MIR504-201ENST00000385065 83 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 RPS7P13-201ENST00000413955 498 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.44□□□□□ -1.86
COL2A1P02458 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.44□□□□□ -1.86
COL2A1P02458 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AL450263.2-201ENST00000439400 589 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 SEPT14P24-201ENST00000447236 180 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 RNU7-140P-201ENST00000459546 60 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC069528.1-202ENST00000482888 637 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC138853.1-201ENST00000503549 823 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC008885.2-201ENST00000509506 930 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 RNU6-718P-201ENST00000516166 105 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AP003392.2-201ENST00000527269 208 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AL358913.1-201ENST00000554342 121 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC012414.6-201ENST00000568241 401 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.44□□□□□ -1.86
COL2A1P02458 MIR5708-201ENST00000579723 85 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 MTCYBP22-201ENST00000603788 447 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 AC126118.1-201ENST00000607744 628 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.44□□□□□ -1.86
COL2A1P02458 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL2A1P02458 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.44□□□□□ -1.86
COL2A1P02458 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.44□□□□□ -1.86
COL2A1P02458 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.44□□□□□ -1.86
COL2A1P02458 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL2A1P02458 AL049555.1-201ENST00000562834 1933 ntBASIC3.44□□□□□ -1.86
COL2A1P02458 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 AC004520.1-201ENST00000608362 1413 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL2A1P02458 CUL4AP1-201ENST00000514750 1863 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 RNU6-353P-201ENST00000364266 108 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 Y_RNA.248-201ENST00000364501 109 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 RNU6-1251P-201ENST00000364502 107 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.43□□□□□ -1.86
COL2A1P02458 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL2A1P02458 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC019097.1-201ENST00000424783 735 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC007327.1-201ENST00000447461 264 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms