Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MTATP6P13-201ENST00000438531 667 ntBASIC3.65□□□□□ -1.83
LDLRP01130 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 MTND5P14-201ENST00000441481 1267 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AL353572.1-201ENST00000442490 417 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RANP8-201ENST00000444720 713 ntBASIC3.65□□□□□ -1.83
LDLRP01130 PRDX3P3-201ENST00000447765 522 ntBASIC3.65□□□□□ -1.83
LDLRP01130 ARPC3P5-201ENST00000448802 534 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 AC007967.1-201ENST00000455422 1159 ntBASIC3.65□□□□□ -1.83
LDLRP01130 CFTRP1-201ENST00000456646 183 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RPS20P24-201ENST00000457473 361 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.65□□□□□ -1.83
LDLRP01130 UBE2CP3-201ENST00000502715 450 ntBASIC3.65□□□□□ -1.83
LDLRP01130 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 TMEM248P1-201ENST00000510579 951 ntBASIC3.65□□□□□ -1.83
LDLRP01130 GMPSP1-201ENST00000514075 579 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.65□□□□□ -1.83
LDLRP01130 RN7SKP116-201ENST00000516902 319 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 OR5G4P-201ENST00000525251 760 ntBASIC3.65□□□□□ -1.83
LDLRP01130 OR4P1P-201ENST00000530808 1136 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LDLRP01130 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
LDLRP01130 ZNF192P1-203ENST00000565888 810 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC107954.1-201ENST00000565906 727 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC012414.6-201ENST00000568241 401 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.65□□□□□ -1.83
LDLRP01130 BBIP1P1-201ENST00000602999 279 ntBASIC3.65□□□□□ -1.83
LDLRP01130 RPL23AP92-201ENST00000603609 255 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.65□□□□□ -1.83
LDLRP01130 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 AL442067.2-201ENST00000614033 363 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC040168.1-201ENST00000623594 991 ntBASIC3.65□□□□□ -1.83
LDLRP01130 AC099063.3-201ENST00000642066 185 ntBASIC3.65□□□□□ -1.83
LDLRP01130 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDLRP01130 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDLRP01130 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.65□□□□□ -1.83
LDLRP01130 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDLRP01130 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDLRP01130 MTND4P16-201ENST00000466108 1367 ntBASIC3.64□□□□□ -1.83
LDLRP01130 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LDLRP01130 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LDLRP01130 USP8P1-201ENST00000494673 3183 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AL157700.1-201ENST00000561973 1432 ntBASIC3.64□□□□□ -1.83
LDLRP01130 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 U3.4-201ENST00000363352 213 ntBASIC3.64□□□□□ -1.83
LDLRP01130 RNU6-867P-201ENST00000364956 107 ntBASIC3.64□□□□□ -1.83
LDLRP01130 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.64□□□□□ -1.83
LDLRP01130 RNU6-878P-201ENST00000384578 110 ntBASIC3.64□□□□□ -1.83
LDLRP01130 MIR30B-201ENST00000384850 88 ntBASIC3.64□□□□□ -1.83
LDLRP01130 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AL391417.1-201ENST00000404100 426 ntBASIC3.64□□□□□ -1.83
LDLRP01130 FCF1P9-201ENST00000412546 282 ntBASIC3.64□□□□□ -1.83
LDLRP01130 MTATP6P27-201ENST00000416987 621 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AL590233.1-201ENST00000430017 456 ntBASIC3.64□□□□□ -1.83
LDLRP01130 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.64□□□□□ -1.83
LDLRP01130 HMGN2P31-201ENST00000432430 273 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.64□□□□□ -1.83
LDLRP01130 Z74696.2-201ENST00000436514 498 ntBASIC3.64□□□□□ -1.83
LDLRP01130 SNRPEP7-201ENST00000438350 220 ntBASIC3.64□□□□□ -1.83
LDLRP01130 LSM1P1-201ENST00000438629 273 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.64□□□□□ -1.83
LDLRP01130 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.64□□□□□ -1.83
LDLRP01130 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.64□□□□□ -1.83
LDLRP01130 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 ZNF114P1-201ENST00000453500 292 ntBASIC3.64□□□□□ -1.83
LDLRP01130 RPL30P9-201ENST00000465586 330 ntBASIC3.64□□□□□ -1.83
LDLRP01130 RPL31P50-201ENST00000471002 296 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC078785.3-201ENST00000476607 425 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.64□□□□□ -1.83
LDLRP01130 MTND5P4-201ENST00000514978 288 ntBASIC3.64□□□□□ -1.83
LDLRP01130 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 CYCSP30-201ENST00000546447 172 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 AC234778.2-201ENST00000566241 354 ntBASIC3.64□□□□□ -1.83
LDLRP01130 ROCK1P1-201ENST00000573767 549 ntBASIC3.64□□□□□ -1.83
LDLRP01130 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 AC022146.1-201ENST00000595307 847 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.64□□□□□ -1.83
LDLRP01130 MTCYBP22-201ENST00000603788 447 ntBASIC3.64□□□□□ -1.83
LDLRP01130 HMGN2P28-201ENST00000606102 262 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC107214.2-201ENST00000608204 634 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC103710.4-201ENST00000609301 899 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC108747.1-201ENST00000609508 535 ntBASIC3.64□□□□□ -1.83
LDLRP01130 AC006329.2-201ENST00000611491 394 ntBASIC3.64□□□□□ -1.83
LDLRP01130 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms