Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL7P60-201ENST00000397636 735 ntBASIC3.88□□□□□ -1.79
RTN3O95197 RNU4-65P-201ENST00000410473 140 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC007390.1-201ENST00000415722 356 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.88□□□□□ -1.79
RTN3O95197 SYF2P2-201ENST00000417620 583 ntBASIC3.88□□□□□ -1.79
RTN3O95197 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.88□□□□□ -1.79
RTN3O95197 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 AL445669.1-201ENST00000426743 755 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AL512649.1-201ENST00000428997 581 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 MTATP6P17-201ENST00000431030 672 ntBASIC3.88□□□□□ -1.79
RTN3O95197 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
RTN3O95197 OR4K11P-201ENST00000431829 904 ntBASIC3.88□□□□□ -1.79
RTN3O95197 SNORD105B-201ENST00000458770 79 ntBASIC3.88□□□□□ -1.79
RTN3O95197 OR2A20P-203ENST00000498397 1268 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC005178.1-201ENST00000508392 440 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.88□□□□□ -1.79
RTN3O95197 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.88□□□□□ -1.79
RTN3O95197 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 GTF2IP22-201ENST00000554443 182 ntBASIC3.88□□□□□ -1.79
RTN3O95197 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.88□□□□□ -1.79
RTN3O95197 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTN3O95197 BCRP9-201ENST00000605312 388 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN3O95197 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN3O95197 AC099778.2-201ENST00000610904 211 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC122133.1-201ENST00000613964 233 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AL450472.3-201ENST00000615578 367 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC009268.2-201ENST00000621925 457 ntBASIC3.88□□□□□ -1.79
RTN3O95197 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN3O95197 AC127502.3-201ENST00000636170 1206 ntBASIC3.88□□□□□ -1.79
RTN3O95197 MIR7153-201ENST00000637758 57 ntBASIC3.88□□□□□ -1.79
RTN3O95197 AC006927.3-201ENST00000638789 384 ntBASIC3.88□□□□□ -1.79
RTN3O95197 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
RTN3O95197 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN3O95197 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
RTN3O95197 AC009902.3-201ENST00000606235 2172 ntBASIC3.87□□□□□ -1.79
RTN3O95197 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN3O95197 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 AC005183.1-201ENST00000603687 1979 ntBASIC3.87□□□□□ -1.79
RTN3O95197 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 CR383658.2-201ENST00000547576 1525 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC011460.1-201ENST00000636268 1834 ntBASIC3.87□□□□□ -1.79
RTN3O95197 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RTN3O95197 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN3O95197 TPMTP3-201ENST00000411928 735 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 AC069157.1-201ENST00000421749 137 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 MTATP6P4-201ENST00000427725 675 ntBASIC3.87□□□□□ -1.79
RTN3O95197 FAM103A2P-201ENST00000444122 354 ntBASIC3.87□□□□□ -1.79
RTN3O95197 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN3O95197 DNAJC19P1-201ENST00000455312 319 ntBASIC3.87□□□□□ -1.79
RTN3O95197 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN3O95197 AC106707.2-201ENST00000484182 374 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC108860.1-201ENST00000484521 383 ntBASIC3.87□□□□□ -1.79
RTN3O95197 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 RPF2P2-201ENST00000504693 896 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC006499.5-201ENST00000505037 514 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN3O95197 RN7SKP209-201ENST00000516888 304 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 AC012435.1-202ENST00000568772 240 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AP001029.3-201ENST00000588063 596 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.87□□□□□ -1.79
RTN3O95197 AC068313.1-201ENST00000604028 1008 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
RTN3O95197 Z99129.2-201ENST00000619967 314 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AC244258.1-201ENST00000637553 1071 ntBASIC3.87□□□□□ -1.79
RTN3O95197 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RTN3O95197 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 AL513185.3-201ENST00000433335 1300 ntBASIC3.87□□□□□ -1.79
RTN3O95197 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RTN3O95197 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTN3O95197 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
RTN3O95197 AP001148.1-201ENST00000624124 2359 ntBASIC3.87□□□□□ -1.79
RTN3O95197 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
RTN3O95197 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTN3O95197 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
RTN3O95197 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN3O95197 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RTN3O95197 RNU6-553P-201ENST00000364047 96 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms