Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC013553.2-201ENST00000604244 589 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AC010680.4-201ENST00000605334 543 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AC021646.1-201ENST00000605469 484 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AC012443.1-201ENST00000605605 231 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 RNU4-89P-201ENST00000607443 133 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AL161616.1-201ENST00000611867 286 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AP001486.3-201ENST00000615334 372 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 AC005858.4-201ENST00000623191 700 ntBASIC4.31□□□□□ -1.72
PRAMEF4O60810 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRAMEF4O60810 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRAMEF4O60810 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRAMEF4O60810 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRAMEF4O60810 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC244517.1-201ENST00000606030 2086 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 RNU6-552P-201ENST00000362869 119 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RN7SKP103-201ENST00000363848 320 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 Y_RNA.231-201ENST00000364358 102 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 MIR135A2-201ENST00000384854 100 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RNU6-903P-201ENST00000391270 109 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RNU4-65P-201ENST00000410473 140 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 BEND7P1-201ENST00000422058 457 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RPS12P10-201ENST00000427031 377 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC008850.1-201ENST00000427546 362 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RPL36AP6-201ENST00000435770 321 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC006466.1-201ENST00000438721 289 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 MTND3P16-201ENST00000452205 344 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RPL21P103-201ENST00000479921 488 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RPS15AP36-201ENST00000492022 382 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC004062.1-201ENST00000509926 645 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC112206.3-201ENST00000514578 389 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 RNU6-1095P-201ENST00000516148 108 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC100870.1-201ENST00000522035 505 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC107953.1-201ENST00000522216 297 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC243972.3-201ENST00000539655 198 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC084783.1-201ENST00000565846 910 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC024619.4-201ENST00000580924 316 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC007448.1-201ENST00000582714 234 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 VN1R80P-201ENST00000597126 338 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AL132765.2-201ENST00000610812 351 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC130324.3-201ENST00000614165 542 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 MIR6130-201ENST00000619419 109 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC009248.2-201ENST00000619826 254 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 OR51H2P-202ENST00000641424 3046 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 AL049555.1-201ENST00000562834 1933 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 AC006026.1-201ENST00000444025 1803 ntBASIC4.3□□□□□ -1.72
PRAMEF4O60810 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRAMEF4O60810 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.3□□□□□ -1.72
PRAMEF4O60810 AL157700.1-201ENST00000561973 1432 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 AC087190.4-201ENST00000574616 8334 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEF4O60810 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 RPS4XP5-202ENST00000449995 1334 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEF4O60810 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEF4O60810 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEF4O60810 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 AC073343.1-201ENST00000328239 651 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 RNU6-188P-201ENST00000364207 107 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 RNA5SP505-201ENST00000364748 108 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 RNU6-712P-201ENST00000410558 100 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 RN7SKP159-201ENST00000410657 292 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRAMEF4O60810 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 AL590139.1-201ENST00000416267 400 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 AL137014.1-201ENST00000420490 1226 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
PRAMEF4O60810 RPL7P12-201ENST00000446719 750 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 AL162389.1-201ENST00000449233 177 ntBASIC4.29□□□□□ -1.72
PRAMEF4O60810 AL118520.1-201ENST00000450770 291 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms