Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 OR5J1P-201ENST00000313544 939 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 Y_RNA.46-201ENST00000362695 102 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RNY4P14-201ENST00000363656 96 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RNU6-1103P-201ENST00000384150 107 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RPL7P25-201ENST00000404151 721 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RNU4-6P-201ENST00000410804 122 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.42□□□□□ -1.86
LMX1BO60663 AL691449.1-201ENST00000426570 421 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AL031736.2-201ENST00000426573 787 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 RPL23AP83-201ENST00000434984 473 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC092013.1-201ENST00000438795 332 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RPL17P49-201ENST00000443728 411 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 RPS26P56-201ENST00000444468 240 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 NFU1P2-201ENST00000448700 469 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 S100A11P1-201ENST00000477525 312 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC006390.1-201ENST00000508068 283 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC009646.1-201ENST00000510455 318 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 FAM92A1P1-201ENST00000528023 890 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.42□□□□□ -1.86
LMX1BO60663 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.42□□□□□ -1.86
LMX1BO60663 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 AL121579.1-201ENST00000555129 305 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC018552.3-201ENST00000567416 561 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC091135.1-201ENST00000585943 307 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC020914.4-201ENST00000597690 277 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AP000907.4-201ENST00000604143 237 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC011451.2-201ENST00000604303 598 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC104458.1-201ENST00000608243 463 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 AC116447.1-201ENST00000613153 453 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 RMST_9.1-201ENST00000619945 193 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.42□□□□□ -1.86
LMX1BO60663 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.42□□□□□ -1.86
LMX1BO60663 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LMX1BO60663 FAM35DP-201ENST00000323387 2712 ntBASIC3.42□□□□□ -1.86
LMX1BO60663 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.41□□□□□ -1.86
LMX1BO60663 Y_RNA.9-201ENST00000362354 101 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 SNORA60-201ENST00000362396 134 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RNU6-525P-201ENST00000363685 104 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RNY4P34-201ENST00000364779 95 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RNU6-1279P-201ENST00000383917 103 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RNU6-1226P-201ENST00000384317 107 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.41□□□□□ -1.86
LMX1BO60663 FGF7P8-201ENST00000402994 292 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AL603766.1-201ENST00000407763 664 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AL023807.1-201ENST00000407932 359 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.41□□□□□ -1.86
LMX1BO60663 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.41□□□□□ -1.86
LMX1BO60663 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.41□□□□□ -1.86
LMX1BO60663 MTND4LP10-201ENST00000435146 291 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC083863.1-201ENST00000438811 231 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AL500522.2-201ENST00000448562 343 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC005297.2-201ENST00000450430 606 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RPL31P58-201ENST00000469001 379 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RPL7P49-201ENST00000471402 708 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC087312.1-201ENST00000471411 480 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC087879.1-201ENST00000474343 374 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 RN7SL271P-201ENST00000487601 295 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AL139099.1-201ENST00000497398 403 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 HMGB1P29-201ENST00000505659 499 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.41□□□□□ -1.86
LMX1BO60663 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.41□□□□□ -1.86
LMX1BO60663 AC090281.1-201ENST00000523019 276 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AP001893.2-201ENST00000526949 202 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 OR5AQ1P-201ENST00000527596 927 ntBASIC3.41□□□□□ -1.86
LMX1BO60663 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMX1BO60663 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms