Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX3O60493 AC078883.4-201ENST00000623218 367 ntBASIC3.29□□□□□ -1.88
SNX3O60493 MIR7641-1-201ENST00000627518 61 ntBASIC3.29□□□□□ -1.88
SNX3O60493 MIR492-201ENST00000638676 116 ntBASIC3.29□□□□□ -1.88
SNX3O60493 OR8B1P-202ENST00000641132 1178 ntBASIC3.29□□□□□ -1.88
SNX3O60493 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SNX3O60493 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX3O60493 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX3O60493 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 AC006378.2-201ENST00000623178 2476 ntBASIC3.28□□□□□ -1.88
SNX3O60493 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SNX3O60493 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SNX3O60493 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX3O60493 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX3O60493 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SNX3O60493 Y_RNA.97-201ENST00000363094 102 ntBASIC3.28□□□□□ -1.88
SNX3O60493 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SNX3O60493 SNORD116-8-201ENST00000384365 95 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC025750.1-201ENST00000399891 379 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL049693.1-201ENST00000402760 611 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL031577.2-201ENST00000404133 280 ntBASIC3.28□□□□□ -1.88
SNX3O60493 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX3O60493 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX3O60493 HMGN2P7-201ENST00000456186 273 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX3O60493 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 BET1P1-201ENST00000482276 359 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.28□□□□□ -1.88
SNX3O60493 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 AC087373.1-201ENST00000524920 491 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX3O60493 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC025884.1-201ENST00000556034 378 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX3O60493 MIR3915-201ENST00000578518 97 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX3O60493 MIR4506-201ENST00000584693 77 ntBASIC3.28□□□□□ -1.88
SNX3O60493 UBE2L4-201ENST00000587688 464 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL158211.4-201ENST00000606988 584 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC006023.2-201ENST00000609916 167 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL158801.5-201ENST00000623123 465 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC007494.3-201ENST00000624660 743 ntBASIC3.28□□□□□ -1.88
SNX3O60493 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 AC006927.3-201ENST00000638789 384 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AL133383.2-201ENST00000622958 2336 ntBASIC3.28□□□□□ -1.88
SNX3O60493 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX3O60493 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX3O60493 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
SNX3O60493 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 RNY3P9-201ENST00000384727 106 ntBASIC3.27□□□□□ -1.89
SNX3O60493 MIR30B-201ENST00000384850 88 ntBASIC3.27□□□□□ -1.89
SNX3O60493 RPS3AP24-201ENST00000407896 734 ntBASIC3.27□□□□□ -1.89
SNX3O60493 TPMTP3-201ENST00000411928 735 ntBASIC3.27□□□□□ -1.89
SNX3O60493 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 AC245054.2-201ENST00000415639 319 ntBASIC3.27□□□□□ -1.89
SNX3O60493 CCDC58P2-201ENST00000417131 366 ntBASIC3.27□□□□□ -1.89
SNX3O60493 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX3O60493 AC108734.1-201ENST00000439549 399 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 GAPDHP27-201ENST00000447427 1020 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 AC234775.1-201ENST00000454247 670 ntBASIC3.27□□□□□ -1.89
SNX3O60493 RPL23AP31-201ENST00000456160 467 ntBASIC3.27□□□□□ -1.89
SNX3O60493 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 SETP11-201ENST00000473027 690 ntBASIC3.27□□□□□ -1.89
SNX3O60493 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 RPS4XP13-201ENST00000483219 789 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AL139099.1-201ENST00000497398 403 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX3O60493 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX3O60493 AC103783.1-201ENST00000520506 373 ntBASIC3.27□□□□□ -1.89
SNX3O60493 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX3O60493 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX3O60493 AC007991.1-201ENST00000522680 631 ntBASIC3.27□□□□□ -1.89
SNX3O60493 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SNX3O60493 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 AC055876.1-202ENST00000567053 138 ntBASIC3.27□□□□□ -1.89
SNX3O60493 MIR4307-201ENST00000582802 84 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AP001429.1-201ENST00000602568 530 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AL606490.9-201ENST00000603331 271 ntBASIC3.27□□□□□ -1.89
SNX3O60493 AP000403.1-201ENST00000603349 851 ntBASIC3.27□□□□□ -1.89
SNX3O60493 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms