Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.59□□□□□ -1.83
AP3D1O14617 UBE2FP1-201ENST00000416536 447 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 TMEM167AP1-201ENST00000423409 219 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 USP9YP36-201ENST00000424581 829 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3D1O14617 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3D1O14617 TAAR7P-201ENST00000436141 242 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3D1O14617 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3D1O14617 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3D1O14617 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3D1O14617 RNU7-59P-201ENST00000459101 61 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 RPS7P7-201ENST00000463499 571 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3D1O14617 RPS15AP36-201ENST00000492022 382 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC020893.1-201ENST00000502452 580 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 RPF2P2-201ENST00000504693 896 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
AP3D1O14617 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
AP3D1O14617 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3D1O14617 GMPSP1-201ENST00000514075 579 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC116347.2-201ENST00000514912 523 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC087369.1-201ENST00000520775 996 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AP000907.2-201ENST00000530827 353 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 YPEL5P3-201ENST00000547227 352 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.59□□□□□ -1.83
AP3D1O14617 AC004024.1-201ENST00000549244 247 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 MTND3P12-201ENST00000559068 328 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC005951.2-201ENST00000576282 495 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AL606834.2-201ENST00000602954 668 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC119501.1-201ENST00000603646 475 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AL590392.1-201ENST00000604960 446 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3D1O14617 AC004696.1-201ENST00000614345 607 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 Z99129.2-201ENST00000619967 314 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC073530.2-201ENST00000623987 261 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 AC091905.1-201ENST00000624400 311 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3D1O14617 AL445523.1-201ENST00000451184 1362 ntBASIC3.59□□□□□ -1.83
AP3D1O14617 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
AP3D1O14617 PABPC1P9-201ENST00000426076 1612 ntBASIC3.59□□□□□ -1.84
AP3D1O14617 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 SNORA62-201ENST00000365493 153 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 RNU1-39P-201ENST00000383897 165 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AC110754.1-201ENST00000399740 601 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 RPL7P25-201ENST00000404151 721 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 RNU6-1077P-201ENST00000410506 102 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3D1O14617 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.58□□□□□ -1.84
AP3D1O14617 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3D1O14617 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3D1O14617 MTCO3P45-201ENST00000443036 613 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AL590664.1-201ENST00000448065 339 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 MTCO3P20-201ENST00000454926 688 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3D1O14617 RPS3AP43-201ENST00000479743 781 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 RPL30P5-201ENST00000494923 336 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.58□□□□□ -1.84
AP3D1O14617 RNU6-840P-201ENST00000517275 65 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AC106038.2-201ENST00000520706 568 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 IGHV3-76-201ENST00000522465 295 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 CASP1P1-201ENST00000526345 212 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 HIGD1AP5-201ENST00000529959 259 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3D1O14617 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3D1O14617 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.58□□□□□ -1.84
AP3D1O14617 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3D1O14617 AC013553.2-201ENST00000604244 589 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 SNORA51-201ENST00000606420 132 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 OR10AB1P-201ENST00000609613 938 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 AC006338.2-201ENST00000616864 791 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
AP3D1O14617 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
AP3D1O14617 AC112484.5-201ENST00000624189 228 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 AC093591.3-201ENST00000634516 308 ntBASIC3.58□□□□□ -1.84
AP3D1O14617 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
AP3D1O14617 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
AP3D1O14617 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
AP3D1O14617 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
AP3D1O14617 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
AP3D1O14617 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3D1O14617 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP3D1O14617 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
AP3D1O14617 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
AP3D1O14617 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.57□□□□□ -1.84
AP3D1O14617 MIR372-201ENST00000362225 67 ntBASIC3.57□□□□□ -1.84
AP3D1O14617 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms