Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 VN1R42P-201ENST00000424651 344 ntBASIC3.95□□□□□ -1.78
CUX2O14529 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.95□□□□□ -1.78
CUX2O14529 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.95□□□□□ -1.78
CUX2O14529 RPL21P71-201ENST00000465598 459 ntBASIC3.95□□□□□ -1.78
CUX2O14529 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.95□□□□□ -1.78
CUX2O14529 AP003049.1-201ENST00000529418 457 ntBASIC3.95□□□□□ -1.78
CUX2O14529 OR4T1P-201ENST00000554933 911 ntBASIC3.95□□□□□ -1.78
CUX2O14529 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.95□□□□□ -1.78
CUX2O14529 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.95□□□□□ -1.78
CUX2O14529 AC002984.1-201ENST00000591692 448 ntBASIC3.95□□□□□ -1.78
CUX2O14529 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CUX2O14529 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CUX2O14529 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.95□□□□□ -1.78
CUX2O14529 AC008432.1-201ENST00000615912 1320 ntBASIC3.94□□□□□ -1.78
CUX2O14529 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUX2O14529 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUX2O14529 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUX2O14529 RNU6-661P-201ENST00000362409 107 ntBASIC3.94□□□□□ -1.78
CUX2O14529 MIR124-3-201ENST00000384866 87 ntBASIC3.94□□□□□ -1.78
CUX2O14529 RNU2-72P-201ENST00000411175 163 ntBASIC3.94□□□□□ -1.78
CUX2O14529 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.94□□□□□ -1.78
CUX2O14529 AL390023.1-201ENST00000428836 262 ntBASIC3.94□□□□□ -1.78
CUX2O14529 MTCO1P43-201ENST00000431831 488 ntBASIC3.94□□□□□ -1.78
CUX2O14529 AL590762.3-201ENST00000436372 640 ntBASIC3.94□□□□□ -1.78
CUX2O14529 AC004865.1-201ENST00000442276 1003 ntBASIC3.94□□□□□ -1.78
CUX2O14529 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.94□□□□□ -1.78
CUX2O14529 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.94□□□□□ -1.78
CUX2O14529 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CUX2O14529 CBX3P5-201ENST00000552017 521 ntBASIC3.94□□□□□ -1.78
CUX2O14529 SUB1P3-201ENST00000564581 315 ntBASIC3.94□□□□□ -1.78
CUX2O14529 AC095057.3-201ENST00000567102 1157 ntBASIC3.94□□□□□ -1.78
CUX2O14529 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.94□□□□□ -1.78
CUX2O14529 AC108479.2-201ENST00000617314 601 ntBASIC3.94□□□□□ -1.78
CUX2O14529 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CUX2O14529 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CUX2O14529 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.93□□□□□ -1.78
CUX2O14529 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CUX2O14529 U8.10-201ENST00000384260 133 ntBASIC3.93□□□□□ -1.78
CUX2O14529 SNORA51.12-201ENST00000384448 134 ntBASIC3.93□□□□□ -1.78
CUX2O14529 AL162578.1-201ENST00000406202 378 ntBASIC3.93□□□□□ -1.78
CUX2O14529 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.93□□□□□ -1.78
CUX2O14529 AC092170.1-201ENST00000440211 356 ntBASIC3.93□□□□□ -1.78
CUX2O14529 VN1R17P-201ENST00000472048 1090 ntBASIC3.93□□□□□ -1.78
CUX2O14529 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.93□□□□□ -1.78
CUX2O14529 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.93□□□□□ -1.78
CUX2O14529 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.93□□□□□ -1.78
CUX2O14529 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.93□□□□□ -1.78
CUX2O14529 OR4H12P-201ENST00000556269 907 ntBASIC3.93□□□□□ -1.78
CUX2O14529 AC061975.8-201ENST00000587058 721 ntBASIC3.93□□□□□ -1.78
CUX2O14529 VN1R79P-201ENST00000593540 513 ntBASIC3.93□□□□□ -1.78
CUX2O14529 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.93□□□□□ -1.78
CUX2O14529 AC097460.3-201ENST00000623099 442 ntBASIC3.93□□□□□ -1.78
CUX2O14529 AC073592.7-201ENST00000623659 507 ntBASIC3.93□□□□□ -1.78
CUX2O14529 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.93□□□□□ -1.78
CUX2O14529 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CUX2O14529 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CUX2O14529 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CUX2O14529 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CUX2O14529 MFSD8-213ENST00000641134 1327 ntBASIC3.93□□□□□ -1.78
CUX2O14529 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.92□□□□□ -1.78
CUX2O14529 RNU6-1339P-201ENST00000363574 91 ntBASIC3.92□□□□□ -1.78
CUX2O14529 Y_RNA.374-201ENST00000365606 101 ntBASIC3.92□□□□□ -1.78
CUX2O14529 RNU4-27P-201ENST00000410889 139 ntBASIC3.92□□□□□ -1.78
CUX2O14529 COX6CP2-201ENST00000444980 225 ntBASIC3.92□□□□□ -1.78
CUX2O14529 RPL7P55-201ENST00000450522 746 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.92□□□□□ -1.78
CUX2O14529 RPL21P47-201ENST00000483696 477 ntBASIC3.92□□□□□ -1.78
CUX2O14529 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 RPL38P4-201ENST00000502376 214 ntBASIC3.92□□□□□ -1.78
CUX2O14529 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.92□□□□□ -1.78
CUX2O14529 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.92□□□□□ -1.78
CUX2O14529 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
CUX2O14529 PTP4A1P6-201ENST00000531034 478 ntBASIC3.92□□□□□ -1.78
CUX2O14529 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CUX2O14529 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.92□□□□□ -1.78
CUX2O14529 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.92□□□□□ -1.78
CUX2O14529 AC126118.1-201ENST00000607744 628 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AC002064.3-201ENST00000623448 346 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AP003400.6-201ENST00000624698 740 ntBASIC3.92□□□□□ -1.78
CUX2O14529 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.92□□□□□ -1.78
CUX2O14529 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CUX2O14529 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUX2O14529 AL591416.1-201ENST00000404015 867 ntBASIC3.92□□□□□ -1.78
CUX2O14529 RN7SKP123-201ENST00000410732 291 ntBASIC3.92□□□□□ -1.78
CUX2O14529 PRELID3BP11-201ENST00000414230 479 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AL158825.1-201ENST00000414735 521 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.92□□□□□ -1.78
CUX2O14529 AC104689.1-201ENST00000473356 768 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.92□□□□□ -1.78
CUX2O14529 LINC00888-204ENST00000487386 421 ntBASIC3.92□□□□□ -1.78
CUX2O14529 OR7K1P-201ENST00000546439 926 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AC104229.1-201ENST00000561364 255 ntBASIC3.92□□□□□ -1.78
CUX2O14529 AC092474.3-201ENST00000603022 568 ntBASIC3.92□□□□□ -1.78
CUX2O14529 MIR6504-201ENST00000613520 61 ntBASIC3.92□□□□□ -1.78
CUX2O14529 MIR6864-201ENST00000617935 70 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms