Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC026801.2-201ENST00000515352 425 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 SNORA20.3-201ENST00000516880 132 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 RNU6-709P-201ENST00000517257 104 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 FO082796.1-201ENST00000523795 183 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC126177.3-201ENST00000551839 688 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC055876.1-202ENST00000567053 138 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC025253.1-201ENST00000613623 543 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC092794.2-201ENST00000620933 563 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC138649.5-201ENST00000637456 137 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC104260.2-201ENST00000623551 3497 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 AC016588.2-201ENST00000632484 3021 ntBASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC85CA6NKD9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 NOL8P1-201ENST00000508336 3529 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 RNU4-48P-201ENST00000365559 182 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 MIR183-201ENST00000384958 110 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC068050.1-201ENST00000394891 380 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 SDHCP2-201ENST00000398565 501 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 RNU2-43P-201ENST00000410306 190 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AL606489.2-201ENST00000433886 234 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 CYCSP43-201ENST00000438233 310 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC104651.2-201ENST00000447549 528 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 MTND3P10-201ENST00000450967 341 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AL121603.1-201ENST00000553815 142 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 NRBF2P5-201ENST00000603087 788 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 Z84480.1-201ENST00000605131 311 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AL034351.1-201ENST00000605288 668 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AC243312.2-201ENST00000623340 601 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AL136313.1-201ENST00000624804 202 ntBASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC85CA6NKD9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL450345.1-202ENST00000605741 3881 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 Y_RNA.38-201ENST00000362617 102 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 RNU6-451P-201ENST00000362921 107 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 RNU5E-6P-201ENST00000365574 115 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL136372.1-201ENST00000403060 228 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 RNA5SP118-201ENST00000410385 109 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 OR51A5P-201ENST00000415429 942 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 COX6B1P7-201ENST00000430845 235 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC092162.1-201ENST00000432828 434 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL121871.1-201ENST00000443413 436 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 DHFRP3-201ENST00000455595 559 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 SNORD97-201ENST00000459187 142 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC126389.1-201ENST00000477436 290 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 RPS15AP36-201ENST00000492022 382 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC114797.1-201ENST00000514003 728 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 ARL2BPP2-201ENST00000550907 489 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 HMGN2P28-201ENST00000606102 262 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AP001486.3-201ENST00000615334 372 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AL137003.2-201ENST00000606924 2538 ntBASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms