Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
SHISA3A0PJX4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.152-201ENST00000363578 100 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RNU6-266P-201ENST00000364225 107 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RNU6-14P-201ENST00000384630 106 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RNU6-1109P-201ENST00000391187 107 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RNU2-43P-201ENST00000410306 190 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 DPPA2P2-201ENST00000418220 897 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC243428.1-201ENST00000421099 264 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC097713.2-201ENST00000430199 356 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 ACA64.1-201ENST00000459171 127 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RNA5SP103-201ENST00000459503 118 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC010655.3-201ENST00000478818 450 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RN7SL447P-201ENST00000494711 245 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC025458.1-201ENST00000506046 166 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 SNORA31.3-201ENST00000516029 96 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.668-201ENST00000516233 93 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC069113.1-201ENST00000517763 267 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 MRPS21P7-201ENST00000566937 238 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC067852.4-201ENST00000590314 478 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC012119.1-201ENST00000603184 222 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AL355297.3-201ENST00000604082 446 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 AC018889.1-201ENST00000605372 397 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 CDC27P3-201ENST00000635418 1910 ntBASIC4.59□□□□□ -1.67
SHISA3A0PJX4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SHISA3A0PJX4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.59□□□□□ -1.68
SHISA3A0PJX4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHISA3A0PJX4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHISA3A0PJX4 AC026951.1-201ENST00000559530 2459 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 Y_RNA.39-201ENST00000362620 98 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RNU6-238P-201ENST00000363313 106 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RNA5SP435-201ENST00000364044 108 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 SNORA70E-201ENST00000384492 135 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RNU2-23P-201ENST00000410545 195 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL591212.2-201ENST00000433923 257 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RPL23AP50-201ENST00000434149 455 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC011816.1-201ENST00000441346 546 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC112492.4-201ENST00000456549 352 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 snoU13.3-201ENST00000459441 104 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL133445.1-201ENST00000467051 452 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AP000926.1-201ENST00000479573 241 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RPS27AP13-201ENST00000498403 237 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC009901.1-201ENST00000506703 541 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RNA5SP464-201ENST00000516251 108 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AP005902.1-201ENST00000521358 186 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC022616.4-201ENST00000522985 181 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 ERHP1-201ENST00000523006 310 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 TRIM77BP-201ENST00000524985 1119 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 SUB1P3-201ENST00000564581 315 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC093591.2-201ENST00000565254 3843 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 RN7SL708P-201ENST00000580952 299 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC012616.1-201ENST00000600294 197 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms