Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV5-5A0A0J9YX44 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV5-5A0A0J9YX44 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV5-5A0A0J9YX44 GABPAP-201ENST00000419271 1356 ntBASIC3.12□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU4-91P-201ENST00000364778 135 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 SNORD115.1-201ENST00000391109 76 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 CCNG1P1-201ENST00000406783 885 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP317-201ENST00000410176 116 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP311-201ENST00000411290 116 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC078974.1-201ENST00000411597 223 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL356583.2-201ENST00000426536 280 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC090774.1-201ENST00000435925 246 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 TPT1P14-201ENST00000448018 505 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP269-201ENST00000459032 137 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RN7SL594P-201ENST00000470590 287 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPS4XP13-201ENST00000483219 789 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 NPM1P41-201ENST00000512920 831 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP315-201ENST00000516340 116 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP312-201ENST00000517068 116 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU6-201P-201ENST00000517100 61 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC125611.2-201ENST00000551907 647 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 ZNF519P3-201ENST00000557158 1032 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC012414.6-201ENST00000568241 401 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 MIR5187-201ENST00000583479 76 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 NBR2-204ENST00000587322 63 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL359999.1-201ENST00000604513 294 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC239868.4-201ENST00000608318 671 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC004908.2-201ENST00000609090 574 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC009090.3-201ENST00000616553 565 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC104010.1-201ENST00000616889 150 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC048344.4-201ENST00000619744 527 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC012150.2-201ENST00000621300 544 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC009812.4-201ENST00000569134 1805 ntBASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL133383.2-201ENST00000622958 2336 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 SNORA62-201ENST00000365493 153 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU6-432P-201ENST00000384196 109 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU6-754P-201ENST00000391166 107 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL7P25-201ENST00000404151 721 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU4-65P-201ENST00000410473 140 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPS7P13-201ENST00000413955 498 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC245054.1-201ENST00000420944 258 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL139247.1-201ENST00000422768 325 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 HMGB1P12-201ENST00000438594 598 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL162151.2-201ENST00000448875 158 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL9P32-201ENST00000464118 620 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC055855.1-201ENST00000489563 579 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNA5SP468-201ENST00000516782 93 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 IGKV2D-19-201ENST00000523346 262 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 DEFB108D-201ENST00000527787 222 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AP002748.2-201ENST00000528671 348 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 OR4T1P-201ENST00000554933 911 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 MED28P6-201ENST00000558776 231 ntBASIC3.1□□□□□ -1.91
TRBV5-5A0A0J9YX44 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms