Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC008669.1-201ENST00000565823 2178 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC074029.4-201ENST00000624796 1859 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RNU4-42P-201ENST00000364738 142 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-898P-201ENST00000365627 104 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RNA5SP284-201ENST00000384547 118 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-131P-201ENST00000391144 107 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 GLULP6-201ENST00000399502 913 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RN7SKP126-201ENST00000411143 300 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RPL7P37-201ENST00000425095 738 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 RPL23AP25-201ENST00000430973 463 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC008267.6-201ENST00000441664 139 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 SSXP4-201ENST00000451349 245 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 SERF1AP1-201ENST00000514575 187 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AL121576.1-201ENST00000556055 276 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC109446.1-201ENST00000566172 220 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC174048.1-201ENST00000603389 144 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC098826.3-201ENST00000603823 466 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC007998.5-201ENST00000622938 237 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC140134.1-201ENST00000511830 3544 ntBASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DNMT3AQ9Y6K1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL450326.2-201ENST00000421913 1962 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RNA5SP510-201ENST00000364697 99 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RN7SKP78-201ENST00000364711 318 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-128P-201ENST00000383976 107 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-1127P-201ENST00000384580 107 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RNU6-306P-201ENST00000384617 107 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 RPL11P3-201ENST00000395256 523 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL445189.1-201ENST00000405722 338 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL139095.3-201ENST00000419672 1203 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC093106.2-201ENST00000428212 385 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 MTND6P12-201ENST00000428247 522 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL445305.1-201ENST00000432577 575 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 MRPL48P1-201ENST00000445390 636 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 OR2AQ1P-201ENST00000451972 200 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 FRG2FP-204ENST00000453982 852 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC140059.1-201ENST00000489238 361 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 NDUFB5P1-201ENST00000508134 564 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC233702.2-202ENST00000562547 291 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC096996.1-201ENST00000563813 325 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 SUB1P3-201ENST00000564581 315 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL159153.1-201ENST00000619688 317 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 AL161756.3-201ENST00000641216 2071 ntBASIC5.68□□□□□ -1.5
DNMT3AQ9Y6K1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 SMIM11P1-201ENST00000369586 178 ntBASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 BX682237.1-201ENST00000415016 335 ntBASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 RPS29P14-201ENST00000431518 171 ntBASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 MRPS18BP2-201ENST00000434310 759 ntBASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 AC010631.1-201ENST00000474150 156 ntBASIC5.67□□□□□ -1.5
DNMT3AQ9Y6K1 AC097462.2-201ENST00000504623 481 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms