Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC100793.4-201ENST00000613683 429 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC048347.1-201ENST00000624621 427 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC025048.6-202ENST00000627667 438 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC084035.1-201ENST00000634543 607 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 MTND4P4-201ENST00000439033 1366 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.84□□□□□ -1.8
SNX9Q9Y5X1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX9Q9Y5X1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL023807.1-201ENST00000407932 359 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 TPMTP2-201ENST00000414372 726 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC083875.1-201ENST00000419509 405 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 CYCSP4-201ENST00000429682 331 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC073063.1-201ENST00000434352 607 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 PDSS1P2-201ENST00000449397 678 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 USP9YP34-201ENST00000453983 808 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 TRBV26-201ENST00000456572 344 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 RPL23AP62-201ENST00000463396 453 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 SNRPGP3-201ENST00000469405 227 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 RPL31P50-201ENST00000471002 296 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 RNF138P1-201ENST00000502765 546 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 RNA5SP216-201ENST00000516111 123 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 OR5B10P-201ENST00000532869 642 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 MIR3611-201ENST00000584484 83 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 SNRPGP15-201ENST00000600149 222 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC078795.2-201ENST00000602835 1252 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 BNIP3P11-201ENST00000603878 563 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL009028.1-201ENST00000604895 802 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC068276.1-201ENST00000605793 379 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC004492.1-201ENST00000607036 742 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 U3.45-201ENST00000607547 219 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC097468.3-201ENST00000607956 456 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC010678.1-201ENST00000614118 713 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC025588.4-201ENST00000615802 908 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 MIR6075-201ENST00000620782 95 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 U4.6-201ENST00000621618 127 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX9Q9Y5X1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 RNU6-335P-201ENST00000364563 113 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 Y_RNA.359-201ENST00000365498 102 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 RNY3P10-201ENST00000384764 102 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC127526.1-201ENST00000417526 366 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL445669.1-201ENST00000426743 755 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 ARF4P2-201ENST00000430209 526 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 USP9YP14-201ENST00000430663 563 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 USP9YP28-201ENST00000435142 589 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 MTND5P14-201ENST00000441481 1267 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 RPL21P23-201ENST00000446654 460 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL358232.1-201ENST00000448030 501 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 RPL23AP14-201ENST00000468281 468 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC090453.1-201ENST00000495560 436 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC093809.1-201ENST00000509155 340 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 OR4A45P-201ENST00000529954 901 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL391156.1-201ENST00000554965 554 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 MAGOH2P-202ENST00000584384 429 ntBASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX9Q9Y5X1 AC068790.6-201ENST00000602558 258 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms