Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AP003485.1-201ENST00000625093 753 ntBASIC3.21□□□□□ -1.9
CDC42BPBQ9Y5S2 OR4G3P-201ENST00000633500 913 ntBASIC3.21□□□□□ -1.9
CDC42BPBQ9Y5S2 MFSD8-213ENST00000641134 1327 ntBASIC3.21□□□□□ -1.9
CDC42BPBQ9Y5S2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 Y_RNA.140-201ENST00000363474 103 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 HMGB1P13-201ENST00000406019 642 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AL034374.1-201ENST00000406329 351 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC106883.1-201ENST00000418805 562 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AL645638.1-201ENST00000440519 361 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AL035551.1-201ENST00000446931 348 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR548Y-201ENST00000582739 110 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR4760-201ENST00000585040 80 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC023043.3-201ENST00000593113 385 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AL606834.3-201ENST00000602615 496 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC079610.2-201ENST00000604818 690 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 RNU6-1192P-201ENST00000612197 107 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 RNU6-489P-201ENST00000618289 107 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC145207.9-201ENST00000623802 325 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 AC099654.8-201ENST00000637757 681 ntBASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.2□□□□□ -1.9
CDC42BPBQ9Y5S2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 SNORA72.3-201ENST00000365074 132 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 SPA17P1-201ENST00000416656 452 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 MTCO3P4-201ENST00000419236 787 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 TRAV31-201ENST00000502780 342 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 SUMO2P5-201ENST00000506790 245 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC026412.2-201ENST00000512270 1075 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 RPS27AP18-201ENST00000515536 459 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AL512427.1-201ENST00000618593 349 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC073569.3-201ENST00000619055 682 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 CYCSP49-201ENST00000420810 319 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC092685.1-201ENST00000447960 1243 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 CFTRP1-201ENST00000456646 183 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR4509-3-201ENST00000578671 94 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR4509-2-201ENST00000583920 94 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AL121652.1-201ENST00000608851 448 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR4509-1-201ENST00000618224 94 ntBASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
CDC42BPBQ9Y5S2 MTND5P11-201ENST00000511037 1812 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 HMGB1P10-201ENST00000395823 563 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 HMGB3P31-201ENST00000413333 595 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC241520.1-201ENST00000422654 1099 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC104164.3-201ENST00000467363 1258 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC110760.3-202ENST00000515177 371 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC021451.1-201ENST00000523498 1129 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC087894.1-201ENST00000538359 518 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC090666.1-201ENST00000578241 445 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC018618.2-201ENST00000604770 446 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AC091046.2-201ENST00000620775 665 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 AL590396.4-201ENST00000636779 956 ntBASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42BPBQ9Y5S2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 METTL21EP-201ENST00000298105 713 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 RNU5B-4P-201ENST00000363508 111 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 RNA5SP27-201ENST00000363839 119 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 RNU6-207P-201ENST00000384137 107 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 MIR122-201ENST00000385044 85 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 RPL22P22-201ENST00000395439 379 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 EI24P1-201ENST00000416584 867 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 AC003989.2-201ENST00000440224 169 ntBASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.17□□□□□ -1.9
CDC42BPBQ9Y5S2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms