Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP001005.3-201ENST00000622049 129 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 FP236240.3-201ENST00000623061 327 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF285B-201ENST00000561698 1767 ntBASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA11Q9Y5H2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RNA5SP273-201ENST00000362484 113 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.48-201ENST00000362710 103 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-770P-201ENST00000363929 105 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-1062P-201ENST00000383908 107 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-398P-201ENST00000384143 109 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORA51.11-201ENST00000384442 131 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR578-201ENST00000384828 96 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 GLULP6-201ENST00000399502 913 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AL132765.1-201ENST00000434165 553 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AL360271.2-201ENST00000447710 161 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RPS3AP46-201ENST00000448352 682 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 OR2AQ1P-201ENST00000451972 200 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC108161.1-201ENST00000461060 402 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SL717P-201ENST00000478343 297 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SL570P-201ENST00000484405 292 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SL649P-201ENST00000496974 275 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC008716.1-201ENST00000511084 513 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.667-201ENST00000516212 107 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.680-201ENST00000516441 93 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-143P-201ENST00000516942 93 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR6780B-201ENST00000610307 79 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 SMG1P6-201ENST00000532337 2930 ntBASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA11Q9Y5H2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC073136.1-201ENST00000449426 2884 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP477-201ENST00000362639 119 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.117-201ENST00000363294 101 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP500-201ENST00000364486 119 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.324-201ENST00000365165 102 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SKP69-201ENST00000365390 305 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SKP187-201ENST00000365536 330 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.483-201ENST00000384380 101 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU2-38P-201ENST00000410856 79 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RNF10P1-201ENST00000418589 369 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AL035660.1-201ENST00000422041 222 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC113412.1-201ENST00000425840 504 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RPL29P29-201ENST00000448725 423 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SL168P-201ENST00000463821 279 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RPS17P15-201ENST00000475609 349 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC104109.1-201ENST00000498563 436 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP438-201ENST00000516561 112 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC096996.1-201ENST00000563813 325 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC013244.1-201ENST00000604279 193 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC096772.1-201ENST00000609146 564 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 AC090607.5-201ENST00000615692 224 ntBASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms