Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RPS20P5-201ENST00000434808 360 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 DDX3P2-201ENST00000446138 111 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC133473.1-201ENST00000455173 299 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL23AP24-201ENST00000458203 385 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC008481.1-201ENST00000463278 396 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL23AP2-201ENST00000471227 466 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC109327.1-201ENST00000471666 403 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 KLHL2P1-201ENST00000508691 521 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC023141.12-201ENST00000512399 199 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 SNORA31.20-201ENST00000517111 133 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC123904.3-201ENST00000547218 814 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC087477.6-201ENST00000559595 843 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC092325.1-201ENST00000566449 554 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC023575.1-201ENST00000580510 358 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC006116.10-201ENST00000591836 581 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.6-201ENST00000603753 252 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL022099.1-201ENST00000604551 712 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC008162.1-201ENST00000604718 254 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.1-201ENST00000604752 252 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.5-201ENST00000605253 252 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL136363.1-201ENST00000605349 337 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.8-201ENST00000605353 252 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AL670379.7-201ENST00000605823 252 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RMST_9.1-201ENST00000619945 193 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 AC139769.1-204ENST00000472297 1931 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 EOGT-210ENST00000615922 1931 ntBASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA3Q9Y5H0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC108467.2-201ENST00000617640 1597 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC004520.1-201ENST00000608362 1413 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 RPS4XP8-201ENST00000402039 771 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL136372.1-201ENST00000403060 228 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 TXNP7-201ENST00000406296 293 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 USP9YP27-201ENST00000418455 438 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 OR2AS1P-201ENST00000427827 319 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL21P112-201ENST00000434403 463 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL596276.1-201ENST00000434465 418 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL512326.1-201ENST00000443050 721 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 NPM1P49-201ENST00000448027 714 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC006480.1-201ENST00000449887 378 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL121877.1-201ENST00000453704 622 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 PRDX4P1-201ENST00000507189 574 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC093012.1-202ENST00000549403 582 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR3160-1-201ENST00000577972 85 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AF038458.1-201ENST00000588406 262 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 Z84480.1-201ENST00000605131 311 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC104458.1-201ENST00000608243 463 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 AC068724.3-201ENST00000625906 87 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 MFSD8-242ENST00000641690 4199 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA3Q9Y5H0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms