Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AP002884.2-201ENST00000471647 395 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RPL21P13-201ENST00000488305 481 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 RPL7P23-201ENST00000493874 747 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC104090.1-201ENST00000506341 1171 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC011611.1-201ENST00000552179 197 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 VN1R82P-201ENST00000601481 356 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC004853.1-201ENST00000604902 698 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC106028.5-201ENST00000610332 395 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC018816.2-201ENST00000621460 353 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AL022578.1-201ENST00000439330 1433 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 ZNF807-201ENST00000328088 1707 ntBASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4BQ9Y4P1 MTND5P1-201ENST00000445440 1375 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 MIR591-201ENST00000385290 95 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 RPL22P18-201ENST00000417197 377 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 RPL27AP8-201ENST00000424277 446 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 BX679664.1-201ENST00000434429 253 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 SNRPEP4-201ENST00000435815 279 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 BX322784.1-201ENST00000455793 1077 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC034244.1-201ENST00000507687 207 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC022483.1-201ENST00000514020 567 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC093677.1-201ENST00000514414 678 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC103783.1-201ENST00000520506 373 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 DUXAP1-201ENST00000556632 463 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 MED28P6-201ENST00000558776 231 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC015917.1-201ENST00000579654 510 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 BBIP1P1-201ENST00000602999 279 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AL022099.1-201ENST00000604551 712 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC025588.2-201ENST00000604851 466 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AL390208.1-201ENST00000605885 644 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 TUSC7.1-201ENST00000610969 165 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 AC096577.2-201ENST00000611455 153 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 SNORA50A-202ENST00000629536 136 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4BQ9Y4P1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 FRG1BP-201ENST00000278882 761 ntBASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 RNU6-28P-201ENST00000362378 107 ntBASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 RNU6-157P-201ENST00000383957 107 ntBASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 RPS24P7-201ENST00000416921 246 ntBASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
ATG4BQ9Y4P1 AL158156.1-201ENST00000422509 473 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms