Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHA4Q9UN74 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 ZNF137P-201ENST00000456718 1920 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 OR5P1P-201ENST00000299512 925 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 Y_RNA.197-201ENST00000364004 102 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RNU6-639P-201ENST00000384074 107 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 Z98745.1-201ENST00000402553 494 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RNU2-36P-201ENST00000410361 191 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RN7SKP158-201ENST00000410453 326 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RN7SKP106-201ENST00000410832 272 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC074085.1-201ENST00000413598 418 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RPL36AP6-201ENST00000435770 321 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 Z95327.1-201ENST00000446082 482 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 SCARNA10-201ENST00000459255 330 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC108751.2-201ENST00000469993 231 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 CCDC34P1-201ENST00000507441 517 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC007016.1-201ENST00000512110 244 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 RNU6-1046P-201ENST00000516538 107 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 FAM60DP-201ENST00000524174 632 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 DEFB109D-201ENST00000529497 240 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC024619.4-201ENST00000580924 316 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 CYP2C61P-201ENST00000604072 290 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC019193.3-201ENST00000609144 554 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AL161616.1-201ENST00000611867 286 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AL158196.1-201ENST00000616786 434 ntBASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHA4Q9UN74 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC125257.1-201ENST00000560400 2930 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 BDP1P-201ENST00000582658 1990 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 Y_RNA.187-201ENST00000363918 113 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 RNU6-463P-201ENST00000384340 107 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 RNU6-1304P-201ENST00000411374 106 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 FTLP19-201ENST00000433300 394 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 RPL23AP43-201ENST00000446445 471 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 ISCUP1-201ENST00000454451 448 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL445433.1-201ENST00000457507 257 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 RN7SL809P-201ENST00000482040 297 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC021146.2-201ENST00000504736 556 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC017037.2-201ENST00000513850 890 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC093303.1-201ENST00000514549 295 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 COPS8P3-201ENST00000526024 482 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 DNAJC8P1-201ENST00000554535 372 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 MIR5583-1-201ENST00000580941 59 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC209154.1-201ENST00000582156 337 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 MIR3936-201ENST00000584304 110 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL078596.1-201ENST00000624856 447 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC138305.3-201ENST00000624988 240 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AC009229.4-201ENST00000623854 1947 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL391684.1-202ENST00000641293 1636 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHA4Q9UN74 AL672167.1-205ENST00000641112 3080 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC007823.1-201ENST00000569932 1566 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms