Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SNORA51.12-201ENST00000384448 134 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RNU1-44P-201ENST00000384453 163 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AL109755.1-201ENST00000401791 649 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RPS27AP1-201ENST00000475545 471 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AC139783.2-201ENST00000504847 1145 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RNU6-430P-201ENST00000517078 107 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 EIF4BP1-201ENST00000554881 351 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AL137100.2-201ENST00000555786 315 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 MYL12BP1-201ENST00000569826 507 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AC007363.1-201ENST00000604736 620 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AC004853.1-201ENST00000604902 698 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 AC012078.1-201ENST00000405035 1646 ntBASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL17A1Q9UMD9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.257-201ENST00000364596 102 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 DEFB109C-201ENST00000382575 264 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 DEFB109B-201ENST00000382656 264 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RNU6-723P-201ENST00000383973 107 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.474-201ENST00000384341 102 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 SNORD66.1-201ENST00000391230 76 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 MIR548I2-201ENST00000408348 149 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RNU4-55P-201ENST00000410731 137 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 HMGB1P11-201ENST00000413899 637 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AC017078.1-201ENST00000416146 368 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RPS27AP14-201ENST00000422868 454 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 CACYBPP1-201ENST00000438592 684 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RNA5SP103-201ENST00000459503 118 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RPL7P23-201ENST00000493874 747 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 YPEL5P2-201ENST00000605553 359 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AL627309.6-201ENST00000606857 840 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AC136475.10-201ENST00000620253 385 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 TPTEP1-208ENST00000636884 213 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 ELL2P4-201ENST00000446870 1376 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 NUP58P1-201ENST00000502546 1738 ntBASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL17A1Q9UMD9 RNU5F-6P-201ENST00000362979 116 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 MIR320B1-201ENST00000390209 79 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 NACAP7-201ENST00000407371 609 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 RN7SKP284-201ENST00000411002 343 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 VDAC1P9-201ENST00000412766 841 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC109780.2-201ENST00000413467 845 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 SDCBPP2-201ENST00000424643 885 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AL591419.1-201ENST00000427423 339 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 RPL21P23-201ENST00000446654 460 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 NPM1P39-201ENST00000449818 867 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 EIF4A1P11-201ENST00000451239 222 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 CYCSP35-201ENST00000451978 304 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 SNORD19B-201ENST00000459623 84 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC087312.1-201ENST00000471411 480 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC027575.1-201ENST00000481064 460 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 HMGB1P30-201ENST00000492455 606 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC103851.1-201ENST00000506833 274 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 RN7SKP46-201ENST00000515942 234 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 OR4A45P-201ENST00000529954 901 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC138915.2-201ENST00000569776 97 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC137800.2-201ENST00000574375 120 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 RNU6-84P-201ENST00000607737 102 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC241377.1-201ENST00000619797 406 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 AC091905.2-201ENST00000623143 306 ntBASIC6.09□□□□□ -1.44
COL17A1Q9UMD9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 ZNF962P-201ENST00000443465 3140 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms