Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IFNA20P-201ENST00000436840 528 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC007677.1-201ENST00000445757 515 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC053481.1-201ENST00000467217 306 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC006512.1-201ENST00000468816 291 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 RPL7P19-201ENST00000469948 618 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 RN7SKP219-201ENST00000516825 296 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 RNU7-30P-201ENST00000516835 62 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 GSTP1P1-201ENST00000548078 319 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC128657.1-201ENST00000549459 145 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AL133153.1-201ENST00000557756 303 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC243960.4-201ENST00000600532 288 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC007687.1-201ENST00000602704 304 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AL050343.2-201ENST00000607338 280 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AL160413.1-201ENST00000622780 310 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PPARGC1AQ9UBK2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC073343.1-201ENST00000328239 651 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 MIR195-201ENST00000385194 87 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 RNA5SP397-201ENST00000391323 118 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AL080315.1-201ENST00000406055 466 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 RNU2-29P-201ENST00000410423 189 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 RNU2-39P-201ENST00000410604 198 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 ERLEC1P1-201ENST00000433806 578 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 ELOCP18-201ENST00000434209 337 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC073264.2-201ENST00000448886 166 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC005008.1-201ENST00000456151 612 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC116562.3-201ENST00000506136 177 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC017037.2-201ENST00000513850 890 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-1314P-201ENST00000517139 104 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC068587.5-201ENST00000528506 175 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 PSMA3P-201ENST00000555485 635 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 LLPHP1-201ENST00000603571 367 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AL121992.2-201ENST00000606262 256 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC006329.2-201ENST00000611491 394 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 U3.53-201ENST00000628922 216 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 MFSD8-216ENST00000641147 4009 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC012618.3-205ENST00000637896 1496 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.79□□□□□ -1.64
PPARGC1AQ9UBK2 MTND4P35-201ENST00000604257 1375 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 ASNSP3-201ENST00000451989 1306 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RN7SKP115-201ENST00000363177 317 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 SNORA63-201ENST00000363450 132 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-1227P-201ENST00000383981 107 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 SNORD37.1-201ENST00000390968 65 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 SDHCP2-201ENST00000398565 501 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 TXNP7-201ENST00000406296 293 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AL356967.1-201ENST00000406305 431 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RN7SKP106-201ENST00000410832 272 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC009237.10-201ENST00000414112 510 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 ARL5AP1-201ENST00000418991 388 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms