Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL20A1Q9P218 MTCO1P9-201ENST00000505577 1534 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 GNG5P1-201ENST00000255500 204 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 RNY4P34-201ENST00000364779 95 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL20A1Q9P218 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 MIR449B-201ENST00000384995 97 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 RNU2-47P-201ENST00000410649 186 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 AL137014.1-201ENST00000420490 1226 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 OR2B8P-201ENST00000432841 938 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 GAPDHP17-201ENST00000449858 1001 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 SRRM1P2-201ENST00000464531 1192 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 MTND1P3-201ENST00000484956 952 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AL358832.1-201ENST00000497800 389 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 MTCO2P4-201ENST00000517968 247 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 AL356432.3-201ENST00000568952 465 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC010546.1-201ENST00000569391 485 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 HMGN1P30-201ENST00000589286 268 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC006254.3-201ENST00000603353 884 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC004492.1-201ENST00000607036 742 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC015813.4-201ENST00000610469 179 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 AC110994.2-201ENST00000635481 492 ntBASIC4.32□□□□□ -1.72
COL20A1Q9P218 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL20A1Q9P218 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 MIR208A-201ENST00000362287 71 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 Y_RNA.6-201ENST00000362350 114 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 RNU6-114P-201ENST00000384704 105 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 HMGN1P24-201ENST00000412282 298 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 MTND1P21-201ENST00000412991 285 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC092447.6-201ENST00000414578 210 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 CCDC58P2-201ENST00000417131 366 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AL035423.1-201ENST00000420331 213 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC233728.2-201ENST00000425348 757 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC009961.2-201ENST00000435771 251 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 ARPC3P1-201ENST00000437218 533 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AL049734.2-201ENST00000441066 616 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC084198.1-201ENST00000477747 402 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 RPL37P25-201ENST00000507308 276 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC017037.2-201ENST00000513850 890 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 RNU6-528P-201ENST00000516926 100 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 MYL12AP1-201ENST00000518490 515 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 AP003122.4-201ENST00000530980 758 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC090877.1-201ENST00000561418 344 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 MIR3922-201ENST00000585192 84 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 UBE2L4-201ENST00000587688 464 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC024220.1-201ENST00000603675 484 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AL021997.1-201ENST00000605757 193 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 TUG1_1.1-201ENST00000610654 145 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC073534.2-201ENST00000620377 381 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC009268.2-201ENST00000621925 457 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AL158801.5-201ENST00000623123 465 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC119674.1-207ENST00000641355 633 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC009093.8-201ENST00000641769 292 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 AC027514.1-201ENST00000588561 1603 ntBASIC4.31□□□□□ -1.72
COL20A1Q9P218 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
COL20A1Q9P218 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL20A1Q9P218 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms