Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 HSPA8P4-201ENST00000511877 1920 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 Y_RNA.252-201ENST00000364556 101 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 Y_RNA.364-201ENST00000365532 101 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 SNORA75.6-201ENST00000391318 127 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL160275.3-201ENST00000423876 471 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL590632.1-201ENST00000424289 371 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL160004.2-201ENST00000432935 350 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL591212.2-201ENST00000433923 257 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL359672.1-201ENST00000442302 409 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AL589765.3-201ENST00000446084 462 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 RPS27AP13-201ENST00000498403 237 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 RN7SKP258-201ENST00000517151 304 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 MIR3160-1-201ENST00000577972 85 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 7SK.7-201ENST00000603504 247 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC005014.2-201ENST00000607795 599 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 MIR6830-201ENST00000636015 70 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 AC007159.1-201ENST00000566529 4706 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 ZNF807-201ENST00000328088 1707 ntBASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.59□□□□□ -1.51
CXXC1Q9P0U4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.52
CXXC1Q9P0U4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CXXC1Q9P0U4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CXXC1Q9P0U4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.59□□□□□ -1.52
CXXC1Q9P0U4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CXXC1Q9P0U4 SAMMSON-213ENST00000641336 1521 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 RNU6-288P-201ENST00000363690 104 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.463-201ENST00000384271 102 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.594-201ENST00000410373 140 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 RPL7P37-201ENST00000425095 738 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MTCYBP9-201ENST00000431021 303 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC236972.1-201ENST00000433225 199 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 IFNWP4-201ENST00000453148 294 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC096745.1-201ENST00000509945 370 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC026782.1-201ENST00000512952 449 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 RNU6-764P-201ENST00000516396 105 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MIR3149-201ENST00000584629 83 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC008814.1-201ENST00000603797 406 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MIR92B-201ENST00000607575 96 ntBASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXXC1Q9P0U4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RNU6-45P-201ENST00000384471 107 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SNORD3H-201ENST00000384486 214 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SNORD56.6-201ENST00000384569 71 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms