Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC9.65□□□□□ -0.86
SCAF1Q9H7N4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SCAF1Q9H7N4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC9.65□□□□□ -0.86
SCAF1Q9H7N4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SCAF1Q9H7N4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SCAF1Q9H7N4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SCAF1Q9H7N4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
SCAF1Q9H7N4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SCAF1Q9H7N4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 RNA5SP391-201ENST00000363456 119 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 SNORA58B-201ENST00000364259 136 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 RNU6-592P-201ENST00000411333 103 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 AL035422.1-201ENST00000414193 397 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 RPL23AP75-201ENST00000491601 451 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 RNA5SP318-201ENST00000516352 92 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 BNIP3P5-201ENST00000562290 498 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 AC131009.3-201ENST00000621809 287 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 AC092628.2-201ENST00000622492 339 ntBASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC9.64□□□□□ -0.87
SCAF1Q9H7N4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 RNU6-1164P-201ENST00000364428 107 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 RNU6-1055P-201ENST00000391085 107 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC096638.1-201ENST00000444678 216 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 COX4I1P2-201ENST00000447446 547 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 RPS27AP13-201ENST00000498403 237 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 SNORD46.2-201ENST00000516021 102 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 RN7SL404P-201ENST00000582421 281 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC002545.1-201ENST00000592511 181 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 U1.41-201ENST00000617626 165 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AP005212.3-201ENST00000619964 528 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 SRRM1P3-201ENST00000426911 2678 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 AC027228.2-201ENST00000567141 2154 ntBASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.63□□□□□ -0.87
SCAF1Q9H7N4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 Y_RNA.251-201ENST00000364551 99 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AL133482.1-201ENST00000415988 498 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC097463.1-201ENST00000447288 481 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 snoU13.7-201ENST00000459220 104 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC005532.2-201ENST00000467154 373 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 RN7SL860P-201ENST00000473738 223 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 RNA5SP165-201ENST00000517142 115 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC103783.1-201ENST00000520506 373 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC133485.4-201ENST00000561835 220 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC138907.4-201ENST00000570107 226 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 MIR3646-201ENST00000578301 84 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 MIR4420-201ENST00000583944 77 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AC091193.1-201ENST00000604640 448 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AL049767.1-202ENST00000637826 242 ntBASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SCAF1Q9H7N4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms