Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXP3Q9BZS1 DPY19L2P2-203ENST00000435536 1858 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5□□□□□ -1.61
FOXP3Q9BZS1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 NXPH1-205ENST00000602349 1953 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FOXP3Q9BZS1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5□□□□□ -1.61
FOXP3Q9BZS1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FOXP3Q9BZS1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
FOXP3Q9BZS1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 RNU6-1029P-201ENST00000384109 107 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 MIR548K-201ENST00000408406 116 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL118520.1-201ENST00000450770 291 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC243772.1-201ENST00000451620 410 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 MTND1P9-201ENST00000453775 944 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC006463.2-201ENST00000473326 348 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC021146.2-201ENST00000504736 556 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 RNU7-51P-201ENST00000516560 62 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AL118558.2-201ENST00000556294 238 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 RPL21P7-201ENST00000557463 483 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 MIR4703-201ENST00000577728 79 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 MIR3942-201ENST00000585264 109 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 NF1P5-201ENST00000588287 448 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 CYP2C61P-201ENST00000604072 290 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AP001486.3-201ENST00000615334 372 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 7SK.10-201ENST00000621414 298 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AP001273.1-201ENST00000624493 3152 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC008758.3-201ENST00000507003 1829 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 AC090971.4-201ENST00000560291 1800 ntBASIC5□□□□□ -1.61
FOXP3Q9BZS1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 SAGE4P-201ENST00000442271 3381 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 Y_RNA.133-201ENST00000363428 110 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU1-130P-201ENST00000363930 160 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 Y_RNA.197-201ENST00000364004 102 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU6-641P-201ENST00000384006 107 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 MTCYBP4-201ENST00000401524 249 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU2-39P-201ENST00000410604 198 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC069213.2-201ENST00000420238 366 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC005517.2-201ENST00000424673 553 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL451139.1-201ENST00000434718 346 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RPS29P33-201ENST00000456717 146 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU6-1208P-201ENST00000459588 107 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RN7SL738P-201ENST00000470264 297 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC068305.1-201ENST00000497406 726 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU2-10P-201ENST00000516375 211 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 Y_RNA.682-201ENST00000516457 100 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNA5SP360-201ENST00000516555 118 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 RNA5SP503-201ENST00000517047 117 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 HMGB1P41-201ENST00000520234 440 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC093012.1-202ENST00000549403 582 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 DNAJC8P1-201ENST00000554535 372 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 BNIP3P25-201ENST00000596023 559 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 XIAPP1-201ENST00000603162 600 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC105254.2-201ENST00000603636 436 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL592436.1-201ENST00000605135 558 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AC019193.3-201ENST00000609144 554 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL627230.1-201ENST00000613077 211 ntBASIC4.99□□□□□ -1.61
FOXP3Q9BZS1 AL591926.8-201ENST00000616876 211 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms