Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP000484.1-201ENST00000620067 1252 ntBASIC2.54□□□□□ -2
HDHD3Q9BSH5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.54□□□□□ -2
HDHD3Q9BSH5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.54□□□□□ -2
HDHD3Q9BSH5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
HDHD3Q9BSH5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.54□□□□□ -2
HDHD3Q9BSH5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL079305.1-201ENST00000623159 3008 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 DDX43P2-201ENST00000604753 1354 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 Y_RNA.126-201ENST00000363382 111 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 SNORA51.2-201ENST00000364595 132 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 SNORA51.4-201ENST00000364993 124 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 DYNLT3P1-201ENST00000378574 347 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 SNORA7.4-201ENST00000384249 137 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 MIR181B1-201ENST00000385240 110 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 ANAPC10P1-201ENST00000395991 556 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 CYCSP45-201ENST00000402289 315 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 RN7SKP58-201ENST00000411010 305 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 BMS1P22-201ENST00000414726 313 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC079780.1-201ENST00000428259 207 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC005300.1-201ENST00000428401 373 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC097713.2-201ENST00000430199 356 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL159987.2-201ENST00000432754 307 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 Z95327.1-201ENST00000446082 482 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC104308.1-201ENST00000454621 333 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 RPL7P18-201ENST00000478965 734 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 COX7A2P2-201ENST00000505291 250 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 HSPE1P23-201ENST00000509838 286 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 RNU5A-4P-201ENST00000516588 111 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 RNU6-1073P-201ENST00000517182 106 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 DUXAP1-201ENST00000556632 463 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL512347.1-201ENST00000566420 503 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC009220.3-201ENST00000604318 586 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL390208.1-201ENST00000605885 644 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC245297.2-201ENST00000610119 565 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC097478.2-201ENST00000610572 514 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL139418.1-201ENST00000613613 177 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL357080.1-201ENST00000617394 239 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC015967.1-201ENST00000619893 476 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AL356585.4-201ENST00000623078 1229 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC018692.3-201ENST00000623929 123 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.53□□□□□ -2
HDHD3Q9BSH5 AC004925.1-201ENST00000624256 2706 ntBASIC2.53□□□□□ -2
HDHD3Q9BSH5 MTCO1P12-201ENST00000414273 1543 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AL022578.1-201ENST00000439330 1433 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AC011477.1-204ENST00000623416 1325 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RPL7P25-201ENST00000404151 721 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RNU6-757P-201ENST00000410334 100 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RNU2-47P-201ENST00000410649 186 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RPL7P8-201ENST00000411964 730 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RPS24P7-201ENST00000416921 246 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 HMGB1P49-201ENST00000418882 569 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 MTCO1P39-201ENST00000426148 480 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AC091862.1-201ENST00000438016 1100 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 MTND4P6-201ENST00000438297 472 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 EEF1E1P1-201ENST00000446998 430 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 RPL7P52-201ENST00000449200 742 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 PDSS1P2-201ENST00000449397 678 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 USP9YP10-201ENST00000454868 628 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 ARPC3P2-201ENST00000457786 533 ntBASIC2.52□□□□□ -2.01
HDHD3Q9BSH5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms