Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-227P-201ENST00000362865 103 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.82-201ENST00000363000 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.92-201ENST00000363043 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.235-201ENST00000364412 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.306-201ENST00000365015 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.312-201ENST00000365089 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.322-201ENST00000365151 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 RNU6-926P-201ENST00000384075 107 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 RNU6-1025P-201ENST00000410629 104 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 RPL12P18-201ENST00000437175 325 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC005002.2-201ENST00000438228 269 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.650-201ENST00000459002 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC090602.1-201ENST00000469695 252 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC007686.1-201ENST00000488511 463 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 RN7SL561P-201ENST00000488553 281 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC113367.2-201ENST00000505749 160 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 KHDC1P1-201ENST00000511053 508 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.777-201ENST00000516982 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC116917.1-201ENST00000520558 305 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC026826.3-201ENST00000561747 158 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 MIR3154-201ENST00000577829 84 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 FAM60BP-201ENST00000578364 658 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.771-201ENST00000598668 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 AL161629.2-201ENST00000615347 275 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 Y_RNA.789-201ENST00000622480 102 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 MTND1P7-201ENST00000632801 297 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 RNU6-1249P-201ENST00000363237 111 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 Y_RNA.435-201ENST00000384095 112 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 Y_RNA.441-201ENST00000384123 112 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 RNU6-514P-201ENST00000384208 107 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 MIR621-201ENST00000384919 96 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 RNU4-30P-201ENST00000410245 143 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 Y_RNA.629-201ENST00000411368 105 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AL358472.1-201ENST00000431295 329 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC097359.1-201ENST00000447946 463 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC087588.1-201ENST00000462203 316 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC018645.1-201ENST00000505003 109 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 HMGB1P14-201ENST00000557424 591 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC063977.7-201ENST00000594454 337 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC008121.1-201ENST00000603244 268 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC012368.3-201ENST00000604190 219 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC008555.7-201ENST00000605008 583 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 MIR6806-201ENST00000622141 64 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC008785.1-201ENST00000624475 456 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 AL451142.2-201ENST00000429076 2090 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USB1Q9BQ65 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 AC025470.1-201ENST00000510053 2032 ntBASIC5.69□□□□□ -1.5
USB1Q9BQ65 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USB1Q9BQ65 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USB1Q9BQ65 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms