Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SNORD51-201ENST00000384320 80 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 MTATP6P18-201ENST00000417994 673 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC091390.1-201ENST00000433904 331 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC079804.1-201ENST00000461922 436 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 RN7SL385P-201ENST00000468873 276 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC022616.3-201ENST00000523940 148 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AP000827.1-201ENST00000527814 258 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 AL359212.1-201ENST00000556608 614 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4□□□□□ -1.77
SNX18Q96RF0 MIR3146-201ENST00000580367 79 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 RN7SL690P-201ENST00000582087 240 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 MIR5096-201ENST00000583713 70 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 BNIP3P9-201ENST00000603714 553 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC007621.1-201ENST00000604544 437 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AP003117.2-201ENST00000606010 545 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC104260.1-201ENST00000616660 539 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AC112204.3-201ENST00000623822 332 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 AP000843.1-201ENST00000624880 701 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 MTND4P12-201ENST00000498999 1377 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4□□□□□ -1.77
SNX18Q96RF0 EIF2AP4-201ENST00000424793 1781 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 NMD3P1-201ENST00000439704 1488 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL354685.2-201ENST00000448218 1447 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 RNU6-989P-201ENST00000362756 107 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 RNU6-169P-201ENST00000365336 107 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 MIR1183-201ENST00000408856 89 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ELOCP4-201ENST00000420090 333 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC005517.2-201ENST00000424673 553 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 RPL18P10-201ENST00000425606 538 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 RPS27AP12-201ENST00000429552 465 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 USP9YP8-201ENST00000441913 500 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 RPL23AP43-201ENST00000446445 471 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 RAD23BP3-201ENST00000454157 1152 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 RPS29P25-201ENST00000481709 171 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC046134.1-201ENST00000514454 666 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 RN7SKP116-201ENST00000516902 319 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC104383.1-201ENST00000530297 370 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC009643.1-201ENST00000532030 391 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 OR8L1P-201ENST00000534005 955 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 MIR4458-201ENST00000578872 75 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL162413.1-201ENST00000603198 110 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 Z84480.1-201ENST00000605131 311 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AL159972.1-201ENST00000625150 448 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC006065.6-201ENST00000625201 545 ntBASIC3.99□□□□□ -1.77
SNX18Q96RF0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms