Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 TOMM20P2-201ENST00000540082 421 ntBASIC6.3□□□□□ -1.4
LRCH3Q96II8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 MIR5692A1-201ENST00000580523 69 ntBASIC6.3□□□□□ -1.4
LRCH3Q96II8 AC084757.4-201ENST00000616350 526 ntBASIC6.3□□□□□ -1.4
LRCH3Q96II8 AL132640.3-201ENST00000630473 177 ntBASIC6.3□□□□□ -1.4
LRCH3Q96II8 IGHVIII-44-202ENST00000636235 289 ntBASIC6.3□□□□□ -1.4
LRCH3Q96II8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LRCH3Q96II8 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LRCH3Q96II8 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LRCH3Q96II8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LRCH3Q96II8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.3□□□□□ -1.4
LRCH3Q96II8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC007114.2-201ENST00000576014 4281 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.82-201ENST00000363000 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.92-201ENST00000363043 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 RNU6-1243P-201ENST00000364028 107 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.235-201ENST00000364412 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.306-201ENST00000365015 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.312-201ENST00000365089 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.322-201ENST00000365151 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 MIR521-1-201ENST00000384902 87 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 MIR186-201ENST00000384988 86 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 RNU11-4P-201ENST00000391149 133 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC011753.3-201ENST00000443436 406 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AL162389.1-201ENST00000449233 177 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.650-201ENST00000459002 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 VN1R105P-201ENST00000486595 910 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 RNU6-1012P-201ENST00000516606 109 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.777-201ENST00000516982 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC126177.5-201ENST00000549599 178 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC027229.1-201ENST00000583887 253 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.771-201ENST00000598668 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC025588.3-201ENST00000604182 274 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC011476.5-201ENST00000615594 130 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 Y_RNA.789-201ENST00000622480 102 ntBASIC6.29□□□□□ -1.4
LRCH3Q96II8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LRCH3Q96II8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 SAMMSON-226ENST00000642089 1582 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 RNVU1-6-201ENST00000364688 164 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 Y_RNA.308-201ENST00000365043 101 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 U3.35-201ENST00000408405 208 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 RNA5SP487-201ENST00000410186 122 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 RNU2-52P-201ENST00000410680 190 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 AL360271.2-201ENST00000447710 161 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC104164.1-201ENST00000460282 590 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 RN7SL604P-201ENST00000492589 296 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 RNA5SP272-201ENST00000516095 111 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC073916.1-201ENST00000545095 130 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC092470.1-201ENST00000546187 132 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 LRRC37A5P-203ENST00000580181 585 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 RNU4ATAC-201ENST00000580972 127 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 AL137067.2-201ENST00000621202 131 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 AC132068.1-201ENST00000623805 459 ntBASIC6.28□□□□□ -1.4
LRCH3Q96II8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LRCH3Q96II8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.28□□□□□ -1.4
LRCH3Q96II8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
LRCH3Q96II8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms