Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 BX510359.1-201ENST00000456973 237 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 snoU13.3-201ENST00000459441 104 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 HMGB1P25-201ENST00000468402 607 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC107401.1-201ENST00000503426 685 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RNU7-143P-201ENST00000516781 65 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AP003497.1-201ENST00000528472 562 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AP003122.4-201ENST00000530980 758 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC244505.7-201ENST00000599675 272 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 DUXAP4-201ENST00000603046 613 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RNA5SP108-201ENST00000605921 117 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC013476.2-201ENST00000614456 459 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AC002550.2-201ENST00000621246 394 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 MTND5P33-201ENST00000571250 1450 ntBASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TRIM43Q96BQ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.34□□□□□ -1.72
TRIM43Q96BQ3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM43Q96BQ3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM43Q96BQ3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM43Q96BQ3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 EOGT-210ENST00000615922 1931 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 MTND5P26-201ENST00000426018 1752 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 RN7SKP44-201ENST00000363602 316 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 RNU6-517P-201ENST00000384362 110 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 Y_RNA.516-201ENST00000384541 124 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 CYCSP35-201ENST00000451978 304 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 SNORD121B-201ENST00000458838 81 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 RPS3AP17-201ENST00000472594 777 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 RPL9P33-201ENST00000484311 566 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC105252.1-201ENST00000503089 286 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 MTCO2P4-201ENST00000517968 247 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC016957.1-201ENST00000534895 309 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC123904.2-201ENST00000548059 300 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AL356432.3-201ENST00000568952 465 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AC012417.1-201ENST00000582307 1039 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 AL031176.1-201ENST00000604554 466 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM43Q96BQ3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 RNU6-114P-201ENST00000384704 105 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 CCNG1P1-201ENST00000406783 885 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 RNU2-47P-201ENST00000410649 186 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC092447.6-201ENST00000414578 210 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MTND1P1-201ENST00000445453 368 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AL031584.1-201ENST00000447169 754 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MTND1P9-201ENST00000453775 944 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 RPS29P2-201ENST00000479278 136 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 RNU2-46P-201ENST00000517038 113 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MTND1P5-201ENST00000517906 940 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AP003181.2-201ENST00000528941 181 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 OR5B10P-201ENST00000532869 642 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 CR383656.7-201ENST00000548164 174 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AP001094.1-201ENST00000579805 193 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 UBE2L4-201ENST00000587688 464 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AP003465.2-201ENST00000602571 373 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AL161729.4-201ENST00000604650 476 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 BX664608.1-201ENST00000610519 487 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 MIR8069-1-201ENST00000616627 86 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms