Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MIR181B1-201ENST00000385240 110 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 MCTS2P-201ENST00000394552 546 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 YPEL5P1-201ENST00000419731 367 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AL592437.1-201ENST00000443781 492 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AC005297.2-201ENST00000450430 606 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 SNORA9.3-201ENST00000516383 129 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 MIR5589-201ENST00000579442 60 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AC006116.7-201ENST00000590141 756 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 ELL2P4-201ENST00000446870 1376 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP103-201ENST00000459503 118 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AC034222.1-201ENST00000494052 532 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AL161713.1-201ENST00000555538 145 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AC146944.4-201ENST00000602697 718 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 AL449363.1-201ENST00000617815 186 ntBASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SYNE2Q8WXH0 U3.15-201ENST00000365398 212 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC080125.1-201ENST00000414888 684 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC012498.1-201ENST00000424037 437 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP227-201ENST00000516184 113 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AP000907.2-201ENST00000530827 353 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL645939.4-201ENST00000604495 135 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC012640.5-201ENST00000623897 319 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RPL23AP20-201ENST00000447965 421 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RPS3AP22-201ENST00000488297 769 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RPS29P11-201ENST00000496507 171 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 TGIF1P1-201ENST00000558095 802 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC004825.2-201ENST00000616634 455 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 MIR6788-201ENST00000618842 66 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC006001.4-201ENST00000622243 395 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC138965.3-201ENST00000623875 498 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RPS3AP44-201ENST00000425466 790 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 ARL4AP3-201ENST00000441452 574 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC079203.1-201ENST00000487972 404 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC103987.3-201ENST00000582071 292 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC116447.1-201ENST00000613153 453 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 ATG3P1-201ENST00000419507 911 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC023050.2-201ENST00000544968 387 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL034379.1-201ENST00000423216 253 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 MTAPP1-201ENST00000489154 819 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 LRRC34P2-201ENST00000514850 553 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC005498.1-201ENST00000592125 465 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC016877.3-201ENST00000606778 504 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 Y_RNA.778-201ENST00000620203 90 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC012078.1-201ENST00000405035 1646 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 Z75746.1-201ENST00000440243 2080 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC245060.5-201ENST00000610778 3293 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC020633.1-201ENST00000468439 2247 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL162578.1-201ENST00000406202 378 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AC009474.2-201ENST00000451383 136 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 MIR8081-201ENST00000611533 95 ntBASIC0.85□□□□□ -2.27
SYNE2Q8WXH0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 AC093815.1-201ENST00000508637 280 ntBASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 MIR6759-201ENST00000638110 65 ntBASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 AC073901.1-201ENST00000462471 408 ntBASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 MTCYBP19-201ENST00000517463 1124 ntBASIC0.84□□□□□ -2.27
SYNE2Q8WXH0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms