Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-720P-201ENST00000516363 108 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 RNU1-48P-201ENST00000516400 162 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.7□□□□□ -1.82
SNED1Q8TER0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.7□□□□□ -1.82
SNED1Q8TER0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.7□□□□□ -1.82
SNED1Q8TER0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.7□□□□□ -1.82
SNED1Q8TER0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.7□□□□□ -1.82
SNED1Q8TER0 AP001180.3-201ENST00000582221 145 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 AL357078.3-201ENST00000607528 618 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 AC105429.2-201ENST00000610567 517 ntBASIC3.7□□□□□ -1.82
SNED1Q8TER0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNED1Q8TER0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNED1Q8TER0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNED1Q8TER0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNED1Q8TER0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNED1Q8TER0 MTCO1P14-201ENST00000441695 1559 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 Y_RNA.3-201ENST00000362331 103 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 MIR142-201ENST00000384835 87 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 MIR184-201ENST00000384962 84 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 Z98941.1-201ENST00000407764 100 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 MTND1P23-201ENST00000416931 372 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AL050341.1-201ENST00000447743 313 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC093899.1-201ENST00000457984 376 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 SNORD108-201ENST00000459332 71 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC021146.8-201ENST00000507455 733 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC018797.3-201ENST00000513388 1241 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 PTP4A1P6-201ENST00000531034 478 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 MIR4999-201ENST00000585029 91 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 BNIP3P30-201ENST00000601184 574 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AP003117.2-201ENST00000606010 545 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC068944.2-201ENST00000610373 403 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 U6.42-201ENST00000618440 107 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC073569.3-201ENST00000619055 682 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC019226.1-201ENST00000625666 515 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 AC005183.1-201ENST00000603687 1979 ntBASIC3.69□□□□□ -1.82
SNED1Q8TER0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 MTCO1P18-201ENST00000455518 1419 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNED1Q8TER0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 RNA5SP502-201ENST00000362694 119 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNED1Q8TER0 Y_RNA.553-201ENST00000384670 102 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 SNORA40.2-201ENST00000390847 128 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AL031577.2-201ENST00000404133 280 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 FCF1P9-201ENST00000412546 282 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 RPL30P6-201ENST00000475925 342 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC126389.1-201ENST00000477436 290 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC091965.2-201ENST00000512324 613 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 SNORA31.13-201ENST00000516624 135 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 Y_RNA.695-201ENST00000516715 107 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC074029.1-201ENST00000552531 1044 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AADACP1-206ENST00000561502 1193 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 MIR3611-201ENST00000584484 83 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 VN1R74P-201ENST00000613259 503 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC107075.1-201ENST00000613695 314 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.68□□□□□ -1.82
SNED1Q8TER0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNED1Q8TER0 AC116096.1-201ENST00000566804 2314 ntBASIC3.68□□□□□ -1.82
SNED1Q8TER0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNED1Q8TER0 AL031985.3-201ENST00000565390 2449 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC087359.1-201ENST00000508335 1740 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNED1Q8TER0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNED1Q8TER0 RNA5SP27-201ENST00000363839 119 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms