Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX29Q8TEQ0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC103710.2-202ENST00000641454 2853 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RNU6-1127P-201ENST00000384580 107 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RNU4-65P-201ENST00000410473 140 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 TBCAP2-201ENST00000416175 326 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RPL21P112-201ENST00000434403 463 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC116533.1-201ENST00000459748 321 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL135752.1-201ENST00000479477 471 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC023424.1-201ENST00000496058 459 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RBBP4P6-201ENST00000508098 202 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RNU6-976P-201ENST00000516086 111 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 RNU6-1213P-201ENST00000517075 94 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC009902.1-201ENST00000519351 183 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 CR383656.7-201ENST00000548164 174 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL670379.6-201ENST00000603753 252 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC124312.5-201ENST00000604451 268 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL031176.1-201ENST00000604554 466 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC008162.1-201ENST00000604718 254 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL670379.1-201ENST00000604752 252 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL670379.5-201ENST00000605253 252 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL670379.8-201ENST00000605353 252 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL670379.7-201ENST00000605823 252 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC099654.2-201ENST00000433031 1980 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 PHKBP1-201ENST00000450951 1951 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AC008079.2-201ENST00000623543 20396 ntBASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX29Q8TEQ0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AL359893.1-201ENST00000447628 1580 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AL049641.1-201ENST00000441055 1948 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 RNU6-249P-201ENST00000363016 102 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 SNORD116-11-201ENST00000383882 92 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 RNU6-310P-201ENST00000384655 107 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 RNU6-754P-201ENST00000391166 107 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AL360182.1-201ENST00000397433 468 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 MTCYBP10-201ENST00000424905 650 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 SNRPEP4-201ENST00000435815 279 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 PSMD10P3-201ENST00000437000 448 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 ARL2BPP10-201ENST00000446487 531 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC008526.1-201ENST00000509149 338 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC002456.2-201ENST00000509356 380 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 RNA5SP392-201ENST00000516905 112 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 RNU6-1137P-201ENST00000517073 99 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 MIR3668-201ENST00000582138 75 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC087783.2-201ENST00000605070 562 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 ATP1B3P1-201ENST00000605365 821 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 AC211433.2-201ENST00000608433 387 ntBASIC5.51□□□□□ -1.53
SNX29Q8TEQ0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms