Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 COX6CP8-201ENST00000522620 226 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC092851.1-201ENST00000535964 478 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC135001.1-201ENST00000544546 283 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 OR6C7P-201ENST00000547875 934 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC107954.1-201ENST00000565906 727 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC006270.2-201ENST00000578523 652 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC004223.2-201ENST00000590309 544 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 BBIP1P1-201ENST00000602999 279 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AL355812.1-201ENST00000603215 216 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 IGHV3-29-201ENST00000604817 344 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 HMGB1P50-201ENST00000605814 607 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AL390208.1-201ENST00000605885 644 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 HMGN2P28-201ENST00000606102 262 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 RNU6-88P-201ENST00000606801 100 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC135507.1-201ENST00000607214 561 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 MIR7844-201ENST00000616161 122 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC009090.3-201ENST00000616553 565 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC004009.2-201ENST00000623016 728 ntBASIC2.68□□□□□ -1.98
LINC01006Q8NI28 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.68□□□□□ -1.98
LINC01006Q8NI28 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL353743.1-202ENST00000431724 1695 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RNU4-21P-201ENST00000362802 126 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RNA5SP42-201ENST00000364278 115 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RNA5SP167-201ENST00000365461 116 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNORD116-9-201ENST00000384000 95 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNORD116-3-201ENST00000384287 95 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNORD116-7-201ENST00000384404 95 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNORD116-5-201ENST00000384462 95 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RNA5SP56-201ENST00000410277 118 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 HMGN1P24-201ENST00000412282 298 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 HMGB1P11-201ENST00000413899 637 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC012065.2-201ENST00000421295 375 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC244098.2-201ENST00000422068 99 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL445669.1-201ENST00000426743 755 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC006989.1-201ENST00000427212 131 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC244035.1-201ENST00000430042 390 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 VN1R108P-201ENST00000431580 830 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 MTCO2P16-201ENST00000436962 677 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RSU1P2-202ENST00000437884 485 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNRPEP7-201ENST00000438350 220 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 TAF9P1-201ENST00000445421 515 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 Z75741.1-201ENST00000446793 314 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL671855.1-201ENST00000446875 1203 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AP000936.2-201ENST00000447151 681 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RPL36AP33-201ENST00000450395 310 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 TAF9P2-201ENST00000454958 515 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SNRPGP5-201ENST00000456003 220 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 snoU13.3-201ENST00000459441 104 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC087312.1-201ENST00000471411 480 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL049873.1-201ENST00000480540 376 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC023424.2-201ENST00000493479 777 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC093809.1-201ENST00000509155 340 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 MTND5P13-201ENST00000513046 1079 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RNU6-27P-201ENST00000516146 107 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 IGHV3-32-201ENST00000519182 355 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AP003385.6-201ENST00000531603 374 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL360157.1-201ENST00000565962 87 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 MIR5004-201ENST00000579078 107 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AP001004.1-201ENST00000582468 324 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC010928.3-201ENST00000587712 541 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL669831.4-202ENST00000590817 238 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms