Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC103710.2-202ENST00000641454 2853 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AL031119.1-201ENST00000404707 1879 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 KPNA2P1-201ENST00000458289 1591 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 SNURFL-201ENST00000309296 343 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 SNORA73.1-201ENST00000363107 205 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RNU6-387P-201ENST00000411331 105 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RNU6-516P-201ENST00000411381 104 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RPL30P2-201ENST00000414021 291 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC114482.1-201ENST00000418010 247 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 MTCYBP10-201ENST00000424905 650 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RPL21P112-201ENST00000434403 463 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC104058.1-201ENST00000448028 297 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RN7SL244P-201ENST00000493405 297 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC108078.2-201ENST00000510750 236 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RPL23AP53-201ENST00000521854 457 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 SETP7-201ENST00000552169 453 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AL121576.1-201ENST00000556055 276 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC008269.2-201ENST00000561915 1105 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC011373.1-201ENST00000607270 237 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 FAM157A-202ENST00000615155 405 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AL355365.1-201ENST00000616480 294 ntBASIC4.67□□□□□ -1.66
NUP43Q8NFH3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP43Q8NFH3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 ZNF807-201ENST00000328088 1707 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 STX3-208ENST00000641815 3236 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RPL23P2-201ENST00000320371 421 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RNVU1-3-201ENST00000364313 161 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RNA5SP455-201ENST00000365190 119 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RNA5SP219-201ENST00000390940 113 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 ENSAP1-201ENST00000392855 326 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RPS15AP40-201ENST00000419621 391 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RPL34P20-201ENST00000442771 351 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 H2AFZP6-201ENST00000444403 394 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 BTF3P6-201ENST00000448054 499 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RPS17P2-201ENST00000461663 408 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RPL21P8-201ENST00000465083 535 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 COX6B1P5-201ENST00000509843 249 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 RNU6-764P-201ENST00000516396 105 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 DEFB108D-201ENST00000527787 222 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC008521.1-201ENST00000587471 187 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC073539.2-201ENST00000597113 165 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 MIR6748-201ENST00000610433 71 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 AC007485.1-201ENST00000616755 206 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.66□□□□□ -1.66
NUP43Q8NFH3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUP43Q8NFH3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms