Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL049870.4-201ENST00000555741 486 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 snoU13.31-201ENST00000607291 104 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 VIS1.1-201ENST00000610517 203 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL137847.3-201ENST00000611521 109 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AP003072.5-201ENST00000623872 773 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MDM4-202ENST00000367180 547 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL39P40-201ENST00000445481 146 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL31P53-201ENST00000457065 348 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL23AP45-201ENST00000476406 468 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC104115.2-201ENST00000523026 687 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 CASC16-202ENST00000563844 610 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL23AP84-201ENST00000571193 464 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC106730.3-201ENST00000624568 641 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC009965.2-201ENST00000425328 970 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL21P2-201ENST00000440049 481 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 IGLV3-17-201ENST00000519099 244 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MIR4446-201ENST00000578505 67 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MTND4P34-201ENST00000572715 1371 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 FRG1BP-201ENST00000278882 761 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL591034.1-201ENST00000407447 340 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC129850.1-201ENST00000436203 508 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 HMGN2P20-201ENST00000437531 273 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MTCO3P13-201ENST00000577757 781 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC022079.2-201ENST00000619739 566 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 SPA17P1-201ENST00000416656 452 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC106872.3-201ENST00000495104 446 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNU4-18P-201ENST00000516751 149 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNU6-826P-201ENST00000516827 104 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MIR6073-201ENST00000352083 89 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 SNORA67.3-201ENST00000384366 140 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RNA5SP210-201ENST00000391034 120 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL139156.1-201ENST00000412785 841 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC027673.1-201ENST00000456245 405 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 RPL30P9-201ENST00000465586 330 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 VTRNA2-2P-201ENST00000516091 103 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AC068313.1-201ENST00000604028 1008 ntBASIC0.67□□□□□ -2.3
SYNE1Q8NF91 AL589994.1-201ENST00000404962 340 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC244033.1-201ENST00000426826 870 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU6-717P-201ENST00000459076 104 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RPL21P39-201ENST00000463605 483 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RAD51AP1P1-201ENST00000484195 1001 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL163153.1-201ENST00000554223 283 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MTND5P29-201ENST00000458676 1807 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL512633.1-201ENST00000399931 655 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU2-17P-201ENST00000410290 190 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU2-20P-201ENST00000410425 191 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 BTF3P4-201ENST00000418852 495 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC023347.2-201ENST00000433994 462 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 ARL5AP3-201ENST00000439327 386 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL163540.1-201ENST00000485382 386 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNA5SP490-201ENST00000517141 136 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms