Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC119751.5-201ENST00000514077 770 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 MRPS36P5-201ENST00000551909 298 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 VN1R78P-201ENST00000597393 564 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC013444.2-201ENST00000603317 787 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL365503.1-201ENST00000605247 905 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC084757.4-201ENST00000616350 526 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AL031679.1-201ENST00000400616 525 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 SSXP9-201ENST00000417503 292 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC010099.3-201ENST00000423896 409 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 RPL27AP8-201ENST00000424277 446 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 MTATP6P4-201ENST00000427725 675 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 COX7BP2-201ENST00000437976 242 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 SDCBPP1-201ENST00000440192 890 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 TXNP1-201ENST00000441872 371 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 MTCO2P25-201ENST00000447065 681 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AL353691.1-201ENST00000451332 387 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 TRGVB-201ENST00000453257 471 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC108860.1-201ENST00000484521 383 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC091951.3-201ENST00000504093 246 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC021678.1-201ENST00000505195 936 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 RNU5A-4P-201ENST00000516588 111 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 SNORD59.2-201ENST00000516873 68 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC103783.1-201ENST00000520506 373 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 FAM60DP-201ENST00000524174 632 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 MTND3P12-201ENST00000559068 328 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC008751.2-201ENST00000597885 980 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AL162713.1-201ENST00000604480 262 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC004853.1-201ENST00000604902 698 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC073657.2-201ENST00000605661 303 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 MIR6076-201ENST00000617521 113 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC244100.1-202ENST00000621554 382 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
RTL3Q8N8U3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RTL3Q8N8U3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RNU6-28P-201ENST00000362378 107 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 SNORA63.1-201ENST00000362493 131 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RNU6-560P-201ENST00000364007 108 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RNA5SP72-201ENST00000364442 117 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 MIR135A2-201ENST00000384854 100 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RPS4XP3-201ENST00000398541 413 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 DHFRP6-201ENST00000401776 268 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AL008987.1-201ENST00000415528 237 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC024082.2-201ENST00000434771 238 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AL592447.1-201ENST00000447592 540 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC104308.1-201ENST00000454621 333 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC091153.1-201ENST00000466297 402 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 RPL30P14-201ENST00000482744 348 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 FAM172BP-201ENST00000487497 1089 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 MTCYBP17-201ENST00000503579 789 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 XKRY-201ENST00000510392 1100 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms