Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HMGB1P36-201ENST00000487709 576 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 TXNP6-201ENST00000510190 310 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC116347.2-201ENST00000514912 523 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 FABP5P5-201ENST00000515537 406 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 RNA5SP164-201ENST00000516533 110 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC025881.1-201ENST00000518851 512 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC009101.1-201ENST00000568135 242 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC012213.3-201ENST00000577199 777 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC244505.7-201ENST00000599675 272 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC090425.2-201ENST00000608818 501 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC091953.5-201ENST00000622919 233 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS52Q8N1B4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.09□□□□□ -1.76
VPS52Q8N1B4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.09□□□□□ -1.76
VPS52Q8N1B4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 RNU6-28P-201ENST00000362378 107 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 RNVU1-3-201ENST00000364313 161 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 SNORA9-201ENST00000384215 133 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 Y_RNA.559-201ENST00000384686 107 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MIR183-201ENST00000384958 110 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MTCYBP36-201ENST00000404146 440 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MIR1250-201ENST00000408098 113 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MTCO1P17-201ENST00000411522 491 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 DLGAP5P1-201ENST00000430307 464 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 RPS24P1-201ENST00000438550 371 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 SDCBPP1-201ENST00000440192 890 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL590399.6-201ENST00000446396 307 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 RN7SL293P-201ENST00000481765 281 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 RN7SKP18-201ENST00000516005 275 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 IGKV2-23-201ENST00000518729 323 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL139174.1-201ENST00000531489 886 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC116096.1-201ENST00000566804 2314 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MIR3922-201ENST00000585192 84 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC022146.1-201ENST00000595307 847 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AL355812.1-201ENST00000603215 216 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC092354.2-201ENST00000607786 514 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC103591.3-201ENST00000608684 209 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC100793.4-201ENST00000613683 429 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC010678.1-201ENST00000614118 713 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC104010.1-201ENST00000616889 150 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 AC093591.3-201ENST00000634516 308 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 U6.105-201ENST00000637379 88 ntBASIC4.08□□□□□ -1.76
VPS52Q8N1B4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS52Q8N1B4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AP001148.1-201ENST00000624124 2359 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MTND5P3-201ENST00000438536 1800 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC092447.10-201ENST00000620607 1652 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL161781.1-201ENST00000354277 403 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RNU5E-5P-201ENST00000365379 116 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RNU6-744P-201ENST00000365557 107 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 SNORA75-201ENST00000384158 137 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RNA5SP56-201ENST00000410277 118 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC127526.1-201ENST00000417526 366 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL513174.1-201ENST00000423182 629 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms