Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 HMGN1P8-201ENST00000463578 288 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 COX6CP5-201ENST00000527162 228 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 RFPL1S-203ENST00000539579 330 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC104581.2-201ENST00000572227 430 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13CQ709C8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 RNA5SP402-201ENST00000517148 110 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC103810.1-201ENST00000579873 453 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 AL365400.1-201ENST00000431854 640 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 HMGB1P12-201ENST00000438594 598 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AL138799.3-201ENST00000438968 350 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC092473.1-201ENST00000441098 221 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC092989.1-201ENST00000481235 277 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC079804.2-201ENST00000490376 200 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC002487.1-201ENST00000604565 994 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13CQ709C8 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 USP9YP10-201ENST00000454868 628 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 OR7L1P-201ENST00000456181 380 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 RPS29P29-201ENST00000456396 171 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 POLHP1-201ENST00000411806 470 ntBASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13CQ709C8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13CQ709C8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 AC243773.3-201ENST00000613270 256 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 AC034102.8-201ENST00000615146 484 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13CQ709C8 AC110774.1-201ENST00000623567 2018 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 TRIM60P13-201ENST00000432350 1283 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 EXTL2P1-201ENST00000446218 416 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 CALM1P2-201ENST00000452941 448 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13CQ709C8 ZNF876P-202ENST00000398732 1485 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13CQ709C8 Y_RNA.393-201ENST00000383936 102 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13CQ709C8 AL356575.1-201ENST00000603008 283 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 VIS1.1-201ENST00000610517 203 ntBASIC1.37□□□□□ -2.19
VPS13CQ709C8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13CQ709C8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13CQ709C8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 RNA5SP338-201ENST00000410495 85 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC244033.1-201ENST00000426826 870 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 SNORA25.15-201ENST00000516487 89 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AP001804.3-201ENST00000525146 880 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC007536.1-201ENST00000533382 349 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC007687.1-201ENST00000602704 304 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC080078.3-201ENST00000605407 463 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 RNA5SP160-201ENST00000364866 120 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 AGGF1P8-201ENST00000562979 1000 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC012150.2-201ENST00000621300 544 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC099654.11-201ENST00000638857 294 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13CQ709C8 MTCYBP7-201ENST00000419540 1134 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 RPL39P40-201ENST00000445481 146 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 SUMO2P6-201ENST00000505273 288 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13CQ709C8 MIR1273G-201ENST00000577677 100 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 MIR151B-201ENST00000584249 96 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
VPS13CQ709C8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13CQ709C8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 DYNLT3P1-201ENST00000378574 347 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 Z98749.2-208ENST00000381646 500 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC093331.1-201ENST00000521474 169 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS13CQ709C8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 DDX10P1-201ENST00000448545 1933 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms