Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 CDR1-202ENST00000625883 1485 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 Y_RNA.311-201ENST00000365068 96 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 MIR649-201ENST00000384843 97 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 SNORA26.7-201ENST00000391288 122 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RNU2-71P-201ENST00000411395 189 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RPL36P19-201ENST00000430744 301 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 SETP8-201ENST00000435341 628 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC087879.1-201ENST00000474343 374 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 HMGN2P13-201ENST00000476476 274 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RPL7P18-201ENST00000478965 734 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RPL7P38-201ENST00000488396 739 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC010587.2-201ENST00000511727 448 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 SNORA74D-201ENST00000516404 141 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 MTND2P26-201ENST00000528255 1029 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 MTND3P12-201ENST00000559068 328 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 ZNF415P1-201ENST00000582279 1166 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC012119.1-201ENST00000603184 222 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AL157817.1-201ENST00000614264 790 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC068057.2-201ENST00000624047 895 ntBASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF544Q6NX49 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC005539.1-201ENST00000443768 1479 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 Y_RNA.25-201ENST00000362528 102 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RNU6-525P-201ENST00000363685 104 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RNU6-1243P-201ENST00000364028 107 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AL450338.1-201ENST00000407987 512 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MRPL50P2-201ENST00000416821 482 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 HSPE1P1-201ENST00000421494 318 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RPL21P2-201ENST00000440049 481 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MTND3P1-201ENST00000441336 220 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MTCO3P2-201ENST00000457365 171 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RPS4XP10-201ENST00000465034 731 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RPS26P21-201ENST00000475397 348 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC017015.1-201ENST00000477387 286 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC104057.1-201ENST00000515547 497 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AP003461.1-201ENST00000528866 78 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC009712.1-201ENST00000564938 316 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 SNORD39.3-201ENST00000584451 71 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 MIR4276-201ENST00000584832 70 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC078899.3-201ENST00000599065 212 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 VN1R82P-201ENST00000601481 356 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC131235.4-201ENST00000609288 620 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AL360219.1-201ENST00000610230 366 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 AC004908.3-201ENST00000610248 625 ntBASIC2.92□□□□□ -1.94
ZNF544Q6NX49 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms