Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.63□□□□□ -2.15
TFF3Q07654 AC011611.5-201ENST00000552477 578 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.63□□□□□ -2.15
TFF3Q07654 AC112503.2-201ENST00000609005 552 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
TFF3Q07654 AC121761.2-201ENST00000617300 689 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AC091046.2-201ENST00000620775 665 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 AC091953.2-201ENST00000623979 160 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.63□□□□□ -2.15
TFF3Q07654 AC009487.4-201ENST00000624969 3585 ntBASIC1.63□□□□□ -2.15
TFF3Q07654 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TFF3Q07654 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TFF3Q07654 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TFF3Q07654 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TFF3Q07654 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TFF3Q07654 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.62□□□□□ -2.15
TFF3Q07654 MIR1294-201ENST00000408503 142 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 RNA5SP270-201ENST00000411361 118 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC073264.1-201ENST00000411508 416 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 RPS6P14-201ENST00000425165 719 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC114973.1-201ENST00000429057 632 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.62□□□□□ -2.15
TFF3Q07654 RPL23AP76-201ENST00000441860 458 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.62□□□□□ -2.15
TFF3Q07654 AC012170.1-201ENST00000495139 359 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.62□□□□□ -2.15
TFF3Q07654 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.62□□□□□ -2.15
TFF3Q07654 FAM92A1P1-201ENST00000528023 890 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 NOP56P3-201ENST00000549457 385 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC126177.3-201ENST00000551839 688 ntBASIC1.62□□□□□ -2.15
TFF3Q07654 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.62□□□□□ -2.15
TFF3Q07654 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TFF3Q07654 AL157700.1-201ENST00000561973 1432 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC093536.2-201ENST00000565257 1406 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TFF3Q07654 FGF7P8-201ENST00000402994 292 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.61□□□□□ -2.15
TFF3Q07654 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.61□□□□□ -2.15
TFF3Q07654 HMGB3P15-201ENST00000507326 574 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.61□□□□□ -2.15
TFF3Q07654 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
TFF3Q07654 AC010625.1-201ENST00000511296 403 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.61□□□□□ -2.15
TFF3Q07654 MIR5194-201ENST00000582634 120 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC020895.1-201ENST00000595362 272 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.61□□□□□ -2.15
TFF3Q07654 AC068790.3-201ENST00000602988 553 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.61□□□□□ -2.15
TFF3Q07654 uc_338.20-201ENST00000621563 178 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 MFSD8-245ENST00000641743 948 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC107021.2-201ENST00000567714 2095 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 AC090740.1-201ENST00000623193 2262 ntBASIC1.61□□□□□ -2.15
TFF3Q07654 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TFF3Q07654 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.6□□□□□ -2.15
TFF3Q07654 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
TFF3Q07654 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
TFF3Q07654 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TFF3Q07654 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TFF3Q07654 AL021407.1-201ENST00000404531 386 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 MIR1287-201ENST00000408492 90 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.6□□□□□ -2.15
TFF3Q07654 AP1B1P2-201ENST00000416196 106 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TFF3Q07654 EIF1AXP1-201ENST00000419267 435 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.6□□□□□ -2.15
TFF3Q07654 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 SNRPFP2-201ENST00000440710 251 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.6□□□□□ -2.15
TFF3Q07654 RN7SL274P-201ENST00000492268 272 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 MLLT10P2-201ENST00000506434 249 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 SEM1P1-201ENST00000506694 209 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 FABP5P6-201ENST00000510588 409 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.6□□□□□ -2.15
TFF3Q07654 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.6□□□□□ -2.15
TFF3Q07654 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.6□□□□□ -2.15
TFF3Q07654 AC125611.2-201ENST00000551907 647 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 ANP32BP3-201ENST00000559213 706 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 AC067805.1-201ENST00000559344 470 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 MIR5694-201ENST00000581190 76 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 RPP40P2-201ENST00000603596 712 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 AL590099.1-201ENST00000615276 138 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 DUXAP9-208ENST00000622815 614 ntBASIC1.6□□□□□ -2.15
TFF3Q07654 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.6□□□□□ -2.15
TFF3Q07654 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.59□□□□□ -2.15
TFF3Q07654 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TFF3Q07654 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TFF3Q07654 SNORD56.5-201ENST00000364281 72 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 SUMO2P12-201ENST00000405924 140 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AC109780.2-201ENST00000413467 845 ntBASIC1.59□□□□□ -2.15
TFF3Q07654 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.59□□□□□ -2.15
TFF3Q07654 HSPE1P1-201ENST00000421494 318 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms