Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNA1P78396 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNA1P78396 RNU6-27P-201ENST00000516146 107 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNA1P78396 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 AC093519.1-201ENST00000566109 298 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC055876.1-202ENST00000567053 138 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNA1P78396 ZNF92P2-201ENST00000600543 1059 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC012443.1-201ENST00000605605 231 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AL354696.1-201ENST00000614652 497 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNA1P78396 AP006248.3-201ENST00000623580 594 ntBASIC3.16□□□□□ -1.9
CCNA1P78396 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNA1P78396 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
CCNA1P78396 MTND4P21-201ENST00000453886 1357 ntBASIC3.15□□□□□ -1.9
CCNA1P78396 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CCNA1P78396 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.15□□□□□ -1.9
CCNA1P78396 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCNA1P78396 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AL137014.1-201ENST00000420490 1226 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 OR2AS1P-201ENST00000427827 319 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AL513043.1-201ENST00000439124 535 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AL096803.2-201ENST00000450032 677 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 CBX3P3-201ENST00000508108 532 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 RNA5SP135-201ENST00000517019 125 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNA1P78396 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNA1P78396 SULT1C2P1-202ENST00000562418 459 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC008277.2-201ENST00000605196 797 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCNA1P78396 AL590396.4-201ENST00000636779 956 ntBASIC3.15□□□□□ -1.91
CCNA1P78396 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNA1P78396 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
CCNA1P78396 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNA1P78396 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNA1P78396 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCNA1P78396 MIR16-2-201ENST00000362117 81 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 MIR26A1-201ENST00000362205 77 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 RNU1-35P-201ENST00000362782 153 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCNA1P78396 SNORA51.6-201ENST00000384151 125 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AL355615.1-201ENST00000406187 641 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 MIR1261-201ENST00000408659 82 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AL158050.1-201ENST00000416077 457 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC246680.2-201ENST00000422106 389 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC012497.1-201ENST00000429392 575 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC005345.1-201ENST00000431868 217 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC241584.1-201ENST00000438469 1241 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNA1P78396 AC010625.1-201ENST00000511296 403 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 RNU6-56P-201ENST00000516986 93 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 AP001646.1-201ENST00000527936 915 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 OR7K1P-201ENST00000546439 926 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC007954.1-201ENST00000554198 494 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCNA1P78396 AL731537.2-201ENST00000561565 951 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 ZNF861P-201ENST00000588126 639 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC133794.1-201ENST00000602731 914 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AP002906.1-201ENST00000603405 233 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AL590808.1-201ENST00000618696 141 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC010338.1-201ENST00000621823 717 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNA1P78396 BX649567.1-201ENST00000642071 1134 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
CCNA1P78396 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCNA1P78396 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
CCNA1P78396 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.14□□□□□ -1.91
CCNA1P78396 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms