Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.75□□□□□ -1.65
YBX1P67809 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 AC021006.3-201ENST00000530771 192 ntBASIC4.75□□□□□ -1.65
YBX1P67809 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.75□□□□□ -1.65
YBX1P67809 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.75□□□□□ -1.65
YBX1P67809 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.75□□□□□ -1.65
YBX1P67809 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.75□□□□□ -1.65
YBX1P67809 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.75□□□□□ -1.65
YBX1P67809 MIR4330-201ENST00000579077 105 ntBASIC4.75□□□□□ -1.65
YBX1P67809 COX6CP3-201ENST00000580869 223 ntBASIC4.75□□□□□ -1.65
YBX1P67809 MIR5583-1-201ENST00000580941 59 ntBASIC4.75□□□□□ -1.65
YBX1P67809 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.75□□□□□ -1.65
YBX1P67809 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 AC008782.1-201ENST00000603386 430 ntBASIC4.75□□□□□ -1.65
YBX1P67809 AC006363.1-201ENST00000603806 463 ntBASIC4.75□□□□□ -1.65
YBX1P67809 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.75□□□□□ -1.65
YBX1P67809 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.75□□□□□ -1.65
YBX1P67809 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
YBX1P67809 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
YBX1P67809 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.74□□□□□ -1.65
YBX1P67809 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 AC104260.2-201ENST00000623551 3497 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 AC009643.2-201ENST00000603543 1448 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-179P-201ENST00000363350 107 ntBASIC4.74□□□□□ -1.65
YBX1P67809 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-1032P-201ENST00000384100 107 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-601P-201ENST00000384540 107 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-310P-201ENST00000384655 107 ntBASIC4.74□□□□□ -1.65
YBX1P67809 UBE2V1P2-201ENST00000397758 440 ntBASIC4.74□□□□□ -1.65
YBX1P67809 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 SSXP10-201ENST00000402595 565 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AL139397.2-201ENST00000404529 772 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-847P-201ENST00000411115 108 ntBASIC4.74□□□□□ -1.65
YBX1P67809 HMGB3P2-201ENST00000411913 584 ntBASIC4.74□□□□□ -1.65
YBX1P67809 HMGN1P24-201ENST00000412282 298 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AL591848.1-201ENST00000413092 322 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 CKS1BP6-201ENST00000424932 240 ntBASIC4.74□□□□□ -1.65
YBX1P67809 COX6CP15-201ENST00000426313 211 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RPS26P47-201ENST00000427219 348 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RPL12P25-201ENST00000455592 494 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AL583843.1-201ENST00000456070 346 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RN7SL283P-201ENST00000489055 303 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC068305.1-201ENST00000497406 726 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.74□□□□□ -1.65
YBX1P67809 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 SNORA25.10-201ENST00000515926 124 ntBASIC4.74□□□□□ -1.65
YBX1P67809 RNU6-1213P-201ENST00000517075 94 ntBASIC4.74□□□□□ -1.65
YBX1P67809 FTH1P11-201ENST00000517577 551 ntBASIC4.74□□□□□ -1.65
YBX1P67809 BNIP3P1-201ENST00000547295 580 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.74□□□□□ -1.65
YBX1P67809 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.74□□□□□ -1.65
YBX1P67809 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.74□□□□□ -1.65
YBX1P67809 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.74□□□□□ -1.65
YBX1P67809 TVP23CP2-201ENST00000571473 623 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC138761.3-201ENST00000579993 334 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 NF1P5-201ENST00000588287 448 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC104687.2-201ENST00000604442 342 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AC104662.1-201ENST00000604448 511 ntBASIC4.74□□□□□ -1.65
YBX1P67809 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.74□□□□□ -1.65
YBX1P67809 uc_338.11-201ENST00000619132 160 ntBASIC4.74□□□□□ -1.65
YBX1P67809 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.74□□□□□ -1.65
YBX1P67809 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
YBX1P67809 AC121333.1-201ENST00000567488 2709 ntBASIC4.74□□□□□ -1.65
YBX1P67809 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
YBX1P67809 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 AC099654.2-201ENST00000433031 1980 ntBASIC4.74□□□□□ -1.65
YBX1P67809 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
YBX1P67809 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
YBX1P67809 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
YBX1P67809 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 AC006484.1-201ENST00000435086 1884 ntBASIC4.73□□□□□ -1.65
YBX1P67809 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
YBX1P67809 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.73□□□□□ -1.65
YBX1P67809 SNORA73.1-201ENST00000363107 205 ntBASIC4.73□□□□□ -1.65
YBX1P67809 Y_RNA.135-201ENST00000363439 95 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms