Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.82□□□□□ -2.12
LSM3P62310 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 FAM133DP-201ENST00000464802 691 ntBASIC1.82□□□□□ -2.12
LSM3P62310 S100A11P2-201ENST00000467589 312 ntBASIC1.82□□□□□ -2.12
LSM3P62310 EIF4EP3-201ENST00000498782 656 ntBASIC1.82□□□□□ -2.12
LSM3P62310 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
LSM3P62310 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 HMGN1P28-201ENST00000521340 364 ntBASIC1.82□□□□□ -2.12
LSM3P62310 OR4V1P-201ENST00000525394 1140 ntBASIC1.82□□□□□ -2.12
LSM3P62310 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 AC113192.3-201ENST00000529152 742 ntBASIC1.82□□□□□ -2.12
LSM3P62310 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 AC027176.1-201ENST00000560204 514 ntBASIC1.82□□□□□ -2.12
LSM3P62310 ELOCP29-201ENST00000588193 334 ntBASIC1.82□□□□□ -2.12
LSM3P62310 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM3P62310 AL136295.6-201ENST00000610486 658 ntBASIC1.82□□□□□ -2.12
LSM3P62310 HMGB1P24-202ENST00000615653 685 ntBASIC1.82□□□□□ -2.12
LSM3P62310 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LSM3P62310 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM3P62310 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM3P62310 CU459211.1-201ENST00000635667 749 ntBASIC1.82□□□□□ -2.12
LSM3P62310 MIR203B-201ENST00000636080 86 ntBASIC1.82□□□□□ -2.12
LSM3P62310 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LSM3P62310 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LSM3P62310 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM3P62310 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LSM3P62310 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
LSM3P62310 Y_RNA.126-201ENST00000363382 111 ntBASIC1.81□□□□□ -2.12
LSM3P62310 RNU6-461P-201ENST00000364195 107 ntBASIC1.81□□□□□ -2.12
LSM3P62310 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LSM3P62310 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM3P62310 AC006548.1-201ENST00000427470 102 ntBASIC1.81□□□□□ -2.12
LSM3P62310 UBE2FP3-201ENST00000436366 524 ntBASIC1.81□□□□□ -2.12
LSM3P62310 MTCO3P17-201ENST00000443775 513 ntBASIC1.81□□□□□ -2.12
LSM3P62310 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 FABP5P6-201ENST00000510588 409 ntBASIC1.81□□□□□ -2.12
LSM3P62310 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM3P62310 AP001804.3-201ENST00000525146 880 ntBASIC1.81□□□□□ -2.12
LSM3P62310 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LSM3P62310 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM3P62310 AC007448.1-201ENST00000582714 234 ntBASIC1.81□□□□□ -2.12
LSM3P62310 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.81□□□□□ -2.12
LSM3P62310 AC008739.3-201ENST00000603262 127 ntBASIC1.81□□□□□ -2.12
LSM3P62310 OR2AS2P-201ENST00000606902 342 ntBASIC1.81□□□□□ -2.12
LSM3P62310 AC245100.7-201ENST00000609678 442 ntBASIC1.81□□□□□ -2.12
LSM3P62310 CR381572.1-201ENST00000625098 102 ntBASIC1.81□□□□□ -2.12
LSM3P62310 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LSM3P62310 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
LSM3P62310 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LSM3P62310 SNORA71.3-201ENST00000362582 128 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNA5SP68-201ENST00000363885 119 ntBASIC1.8□□□□□ -2.12
LSM3P62310 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LSM3P62310 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LSM3P62310 RNU6-1074P-201ENST00000383995 104 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNU6-712P-201ENST00000410558 100 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.8□□□□□ -2.12
LSM3P62310 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM3P62310 AC004865.1-201ENST00000442276 1003 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM3P62310 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM3P62310 CBWD4P-201ENST00000445695 655 ntBASIC1.8□□□□□ -2.12
LSM3P62310 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LSM3P62310 SNORA84-201ENST00000459229 133 ntBASIC1.8□□□□□ -2.12
LSM3P62310 snoU13.22-201ENST00000459428 104 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM3P62310 FAM172BP-201ENST00000487497 1089 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RPS27P26-201ENST00000494583 239 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNF138P1-201ENST00000502765 546 ntBASIC1.8□□□□□ -2.12
LSM3P62310 PCNAP1-201ENST00000505363 709 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.8□□□□□ -2.12
LSM3P62310 AC113155.1-201ENST00000511141 769 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.8□□□□□ -2.12
LSM3P62310 OR5BM1P-201ENST00000512021 366 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC117525.1-201ENST00000515228 503 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNU6-202P-201ENST00000515998 96 ntBASIC1.8□□□□□ -2.12
LSM3P62310 RNA5SP281-201ENST00000516504 135 ntBASIC1.8□□□□□ -2.12
LSM3P62310 SCARNA16.3-201ENST00000516595 184 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.8□□□□□ -2.12
LSM3P62310 AC115989.2-201ENST00000578640 563 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC024220.1-201ENST00000603675 484 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AL136363.1-201ENST00000605349 337 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC013468.1-201ENST00000608680 598 ntBASIC1.8□□□□□ -2.12
LSM3P62310 AC110792.4-201ENST00000609843 298 ntBASIC1.8□□□□□ -2.12
LSM3P62310 MIR6817-201ENST00000615588 66 ntBASIC1.8□□□□□ -2.12
LSM3P62310 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LSM3P62310 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
LSM3P62310 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LSM3P62310 OR5J1P-201ENST00000313544 939 ntBASIC1.79□□□□□ -2.12
LSM3P62310 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LSM3P62310 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms