Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL158071.1-201ENST00000430315 461 ntBASIC3.25□□□□□ -1.89
SRP54P61011 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.25□□□□□ -1.89
SRP54P61011 HIGD1AP11-201ENST00000438361 280 ntBASIC3.25□□□□□ -1.89
SRP54P61011 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.25□□□□□ -1.89
SRP54P61011 AC005410.1-202ENST00000460347 485 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.25□□□□□ -1.89
SRP54P61011 MTND1P16-201ENST00000465177 898 ntBASIC3.25□□□□□ -1.89
SRP54P61011 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SRP54P61011 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.25□□□□□ -1.89
SRP54P61011 FCF1P3-201ENST00000496394 590 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC114967.1-201ENST00000504890 259 ntBASIC3.25□□□□□ -1.89
SRP54P61011 CBX3P3-201ENST00000508108 532 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC079395.1-201ENST00000510981 262 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
SRP54P61011 AC107934.2-201ENST00000518653 310 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.25□□□□□ -1.89
SRP54P61011 ERHP1-201ENST00000523006 310 ntBASIC3.25□□□□□ -1.89
SRP54P61011 TGIF1P1-201ENST00000558095 802 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AL512347.1-201ENST00000566420 503 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC013444.2-201ENST00000603317 787 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC005000.2-201ENST00000605468 310 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AL390208.1-201ENST00000605885 644 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC107075.1-201ENST00000613695 314 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC009464.1-201ENST00000615731 469 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC103798.2-201ENST00000624292 632 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC010608.3-201ENST00000625048 527 ntBASIC3.25□□□□□ -1.89
SRP54P61011 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SRP54P61011 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
SRP54P61011 AC009812.4-201ENST00000569134 1805 ntBASIC3.25□□□□□ -1.89
SRP54P61011 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
SRP54P61011 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SRP54P61011 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
SRP54P61011 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SRP54P61011 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
SRP54P61011 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
SRP54P61011 Z92545.1-201ENST00000411782 234 ntBASIC3.24□□□□□ -1.89
SRP54P61011 SSXP9-201ENST00000417503 292 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AL353678.1-201ENST00000422735 741 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRP54P61011 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 BX679664.1-201ENST00000434429 253 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 ATP5C1P1-201ENST00000441945 895 ntBASIC3.24□□□□□ -1.89
SRP54P61011 RNU7-136P-201ENST00000458819 69 ntBASIC3.24□□□□□ -1.89
SRP54P61011 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
SRP54P61011 RPL7P23-201ENST00000493874 747 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC134050.1-201ENST00000495088 933 ntBASIC3.24□□□□□ -1.89
SRP54P61011 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 UBE2V1P12-201ENST00000503954 474 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.24□□□□□ -1.89
SRP54P61011 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.24□□□□□ -1.89
SRP54P61011 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.24□□□□□ -1.89
SRP54P61011 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.24□□□□□ -1.89
SRP54P61011 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.24□□□□□ -1.89
SRP54P61011 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.24□□□□□ -1.89
SRP54P61011 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRP54P61011 MIR5004-201ENST00000579078 107 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC009220.3-201ENST00000604318 586 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC008962.1-201ENST00000605729 304 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AL157392.4-201ENST00000609756 345 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.24□□□□□ -1.89
SRP54P61011 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AL445264.1-201ENST00000621719 171 ntBASIC3.24□□□□□ -1.89
SRP54P61011 AC231657.1-201ENST00000624313 397 ntBASIC3.24□□□□□ -1.89
SRP54P61011 MTND5P24-201ENST00000438892 1767 ntBASIC3.24□□□□□ -1.89
SRP54P61011 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.24□□□□□ -1.89
SRP54P61011 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
SRP54P61011 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRP54P61011 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 OR5BR1P-201ENST00000524992 1330 ntBASIC3.23□□□□□ -1.89
SRP54P61011 MTND5P7-201ENST00000413558 1798 ntBASIC3.23□□□□□ -1.89
SRP54P61011 FRG1BP-201ENST00000278882 761 ntBASIC3.23□□□□□ -1.89
SRP54P61011 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 RNU4-92P-201ENST00000363783 136 ntBASIC3.23□□□□□ -1.89
SRP54P61011 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 Y_RNA.465-201ENST00000384293 102 ntBASIC3.23□□□□□ -1.89
SRP54P61011 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.23□□□□□ -1.89
SRP54P61011 CCDC58P2-201ENST00000417131 366 ntBASIC3.23□□□□□ -1.89
SRP54P61011 MTCYBP45-201ENST00000435243 565 ntBASIC3.23□□□□□ -1.89
SRP54P61011 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
SRP54P61011 RPS29P2-201ENST00000479278 136 ntBASIC3.23□□□□□ -1.89
SRP54P61011 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
SRP54P61011 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 AC022483.1-201ENST00000514020 567 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AC103783.1-201ENST00000520506 373 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms