Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNORD53-201ENST00000579969 78 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 MIR3117-201ENST00000584034 78 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 SRGNP1-201ENST00000603392 451 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 AL159169.3-201ENST00000608871 561 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXA3P55318 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXA3P55318 AC004944.1-201ENST00000517807 3059 ntBASIC1.75□□□□□ -2.13
FOXA3P55318 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
FOXA3P55318 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXA3P55318 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXA3P55318 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXA3P55318 RNU1-140P-201ENST00000365040 165 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 RNU6-198P-201ENST00000384258 104 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 RNU6-301P-201ENST00000384277 107 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MTCO3P30-201ENST00000426425 670 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 LINC00888-204ENST00000487386 421 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 AC079804.2-201ENST00000490376 200 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXA3P55318 NDUFB4P2-201ENST00000509515 391 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 AC105137.2-201ENST00000569073 466 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 RPS3AP23-202ENST00000574601 686 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR4444-1-201ENST00000581696 74 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR3616-201ENST00000584070 92 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR4444-2-201ENST00000584390 74 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXA3P55318 AC112503.2-201ENST00000609005 552 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 AC013562.2-201ENST00000611632 603 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 AC009090.3-201ENST00000616553 565 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR6075-201ENST00000620782 95 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 UCA1.1-201ENST00000620952 75 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR8057-201ENST00000620957 69 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 MIR1291-201ENST00000627649 87 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXA3P55318 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
FOXA3P55318 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
FOXA3P55318 CR848007.1-201ENST00000442354 1699 ntBASIC1.74□□□□□ -2.13
FOXA3P55318 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA3P55318 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
FOXA3P55318 AC097714.1-201ENST00000511272 1647 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AL359511.1-201ENST00000402970 211 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AL591416.1-201ENST00000404015 867 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA3P55318 AL365496.1-201ENST00000426885 215 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 RPL7L1P10-201ENST00000427790 463 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.73□□□□□ -2.13
FOXA3P55318 Z85994.2-201ENST00000434327 452 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA3P55318 AC108734.3-201ENST00000481241 1165 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 RN7SKP24-201ENST00000515888 284 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 SNORA31.18-201ENST00000517043 134 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 BTF3P12-201ENST00000519620 469 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FOXA3P55318 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.73□□□□□ -2.13
FOXA3P55318 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA3P55318 AC074029.2-201ENST00000551045 634 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.73□□□□□ -2.13
FOXA3P55318 MIR4429-201ENST00000580105 73 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA3P55318 AC011374.2-201ENST00000607135 526 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AL353748.2-201ENST00000622148 471 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AC027309.3-201ENST00000623419 351 ntBASIC1.73□□□□□ -2.13
FOXA3P55318 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA3P55318 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
FOXA3P55318 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
FOXA3P55318 SNORA38-201ENST00000363946 132 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 RNU1-85P-201ENST00000364127 164 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 RNU6-173P-201ENST00000364215 104 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 SNORA44-201ENST00000384584 132 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC008280.1-201ENST00000418851 412 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 AC234781.2-201ENST00000426370 994 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC009414.1-201ENST00000427200 443 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 UBE2V1P13-201ENST00000436983 439 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.72□□□□□ -2.13
FOXA3P55318 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 AC087588.1-201ENST00000462203 316 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AL672167.3-201ENST00000465951 960 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms