Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIMK2P53671 RNU6-1249P-201ENST00000363237 111 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 Y_RNA.318-201ENST00000365131 97 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 RNU5A-2P-201ENST00000384337 116 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 RNU6-878P-201ENST00000384578 110 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC068533.2-201ENST00000411872 306 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC006960.1-201ENST00000419980 153 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AL365203.2-201ENST00000423444 196 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.35□□□□□ -1.87
LIMK2P53671 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 RPS15AP17-201ENST00000470598 390 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 RN7SKP57-201ENST00000517248 293 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 SCARNA20.6-201ENST00000517251 106 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 IGKV2-26-201ENST00000518305 343 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.35□□□□□ -1.87
LIMK2P53671 EEF1B2P4-201ENST00000551398 348 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 HSPE1P3-201ENST00000559254 309 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.35□□□□□ -1.87
LIMK2P53671 MIR4637-201ENST00000582405 84 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.35□□□□□ -1.87
LIMK2P53671 AC128687.1-201ENST00000605304 619 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
LIMK2P53671 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
LIMK2P53671 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 AP001148.1-201ENST00000624124 2359 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIMK2P53671 CR383658.2-201ENST00000547576 1525 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK2P53671 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK2P53671 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIMK2P53671 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AL593851.1-201ENST00000426171 157 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 RPL23AP22-201ENST00000437556 453 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 CYCSP32-201ENST00000440548 321 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 AL445669.2-201ENST00000454425 421 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK2P53671 TPTE2P5-203ENST00000458118 728 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 snoU109.4-201ENST00000458953 143 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC026410.2-201ENST00000460281 156 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 VN1R17P-201ENST00000472048 1090 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC017015.1-201ENST00000477387 286 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 RPS3AP43-201ENST00000479743 781 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 RPL23AP55-201ENST00000498163 452 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 RPF2P2-201ENST00000504693 896 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC104090.1-201ENST00000506341 1171 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 OR5BM1P-201ENST00000512021 366 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK2P53671 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK2P53671 RN7SKP289-201ENST00000517244 295 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC104986.1-201ENST00000517978 436 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC109635.4-202ENST00000531666 412 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.34□□□□□ -1.87
LIMK2P53671 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK2P53671 AC002400.1-201ENST00000569310 726 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK2P53671 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AC090425.2-201ENST00000608818 501 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 AL590282.1-201ENST00000610379 1136 ntBASIC3.34□□□□□ -1.87
LIMK2P53671 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK2P53671 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK2P53671 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK2P53671 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK2P53671 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK2P53671 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LIMK2P53671 SGO1P2-201ENST00000429458 1589 ntBASIC3.34□□□□□ -1.88
LIMK2P53671 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 AP000776.1-201ENST00000530032 1663 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms