Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 RNU6-314P-201ENST00000516574 104 ntBASIC4.18□□□□□ -1.74
COPB1P53618 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.18□□□□□ -1.74
COPB1P53618 OR8R1P-201ENST00000543943 764 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AL121576.1-201ENST00000556055 276 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AL157394.1-201ENST00000562983 1224 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.18□□□□□ -1.74
COPB1P53618 MIR4716-201ENST00000579628 84 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.18□□□□□ -1.74
COPB1P53618 AP000860.1-201ENST00000605250 559 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC113194.1-201ENST00000606037 500 ntBASIC4.18□□□□□ -1.74
COPB1P53618 MIR6867-201ENST00000610636 67 ntBASIC4.18□□□□□ -1.74
COPB1P53618 PISRT1-201ENST00000626175 531 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC244258.1-201ENST00000637553 1071 ntBASIC4.18□□□□□ -1.74
COPB1P53618 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COPB1P53618 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COPB1P53618 AC004520.1-201ENST00000608362 1413 ntBASIC4.18□□□□□ -1.74
COPB1P53618 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COPB1P53618 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
COPB1P53618 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.18□□□□□ -1.74
COPB1P53618 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.18□□□□□ -1.74
COPB1P53618 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 ELF2P3-201ENST00000445099 1506 ntBASIC4.17□□□□□ -1.74
COPB1P53618 RLIMP1-201ENST00000339626 1680 ntBASIC4.17□□□□□ -1.74
COPB1P53618 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
COPB1P53618 RPS3AP36-201ENST00000398190 775 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.17□□□□□ -1.74
COPB1P53618 AL589872.1-201ENST00000426602 288 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL590233.1-201ENST00000430017 456 ntBASIC4.17□□□□□ -1.74
COPB1P53618 MTND1P2-201ENST00000430604 821 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.17□□□□□ -1.74
COPB1P53618 RPL17P49-201ENST00000443728 411 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 PLGLA-201ENST00000465668 449 ntBASIC4.17□□□□□ -1.74
COPB1P53618 RPS20P21-201ENST00000466859 343 ntBASIC4.17□□□□□ -1.74
COPB1P53618 MTND1P3-201ENST00000484956 952 ntBASIC4.17□□□□□ -1.74
COPB1P53618 RNF138P1-201ENST00000502765 546 ntBASIC4.17□□□□□ -1.74
COPB1P53618 KCTD9P5-201ENST00000504141 1170 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC116353.2-201ENST00000505332 712 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC006390.1-201ENST00000508068 283 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC093677.1-201ENST00000514414 678 ntBASIC4.17□□□□□ -1.74
COPB1P53618 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.17□□□□□ -1.74
COPB1P53618 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 AC092470.1-201ENST00000546187 132 ntBASIC4.17□□□□□ -1.74
COPB1P53618 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.17□□□□□ -1.74
COPB1P53618 RPS3AP4-201ENST00000555161 764 ntBASIC4.17□□□□□ -1.74
COPB1P53618 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.17□□□□□ -1.74
COPB1P53618 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 CKS1BP3-201ENST00000600888 237 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL359999.1-201ENST00000604513 294 ntBASIC4.17□□□□□ -1.74
COPB1P53618 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 RNU4-89P-201ENST00000607443 133 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.17□□□□□ -1.74
COPB1P53618 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 AC090970.3-201ENST00000612566 866 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL592295.2-201ENST00000612578 206 ntBASIC4.17□□□□□ -1.74
COPB1P53618 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.17□□□□□ -1.74
COPB1P53618 AC007014.2-201ENST00000615581 479 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AL158209.2-201ENST00000619266 216 ntBASIC4.17□□□□□ -1.74
COPB1P53618 AC073534.2-201ENST00000620377 381 ntBASIC4.17□□□□□ -1.74
COPB1P53618 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 AL356321.1-201ENST00000621360 228 ntBASIC4.17□□□□□ -1.74
COPB1P53618 FAM157B-203ENST00000639350 358 ntBASIC4.17□□□□□ -1.74
COPB1P53618 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.17□□□□□ -1.74
COPB1P53618 AC114546.3-201ENST00000623582 1734 ntBASIC4.17□□□□□ -1.74
COPB1P53618 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COPB1P53618 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 AC106871.1-201ENST00000568324 3102 ntBASIC4.16□□□□□ -1.74
COPB1P53618 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.16□□□□□ -1.74
COPB1P53618 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COPB1P53618 SPRR2C-201ENST00000290702 219 ntBASIC4.16□□□□□ -1.74
COPB1P53618 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 Y_RNA.88-201ENST00000363029 99 ntBASIC4.16□□□□□ -1.74
COPB1P53618 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.16□□□□□ -1.74
COPB1P53618 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 RNU6-730P-201ENST00000383954 104 ntBASIC4.16□□□□□ -1.74
COPB1P53618 RNY3P14-201ENST00000384309 102 ntBASIC4.16□□□□□ -1.74
COPB1P53618 GSTA9P-201ENST00000406231 611 ntBASIC4.16□□□□□ -1.74
COPB1P53618 BX295541.1-201ENST00000417774 250 ntBASIC4.16□□□□□ -1.74
COPB1P53618 RPL36AP36-201ENST00000418616 301 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC012065.2-201ENST00000421295 375 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 Z95327.1-201ENST00000446082 482 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms