Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.34□□□□□ -1.56
GRIK1P39086 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.34□□□□□ -1.56
GRIK1P39086 AC010615.1-201ENST00000594254 1764 ntBASIC5.34□□□□□ -1.56
GRIK1P39086 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
GRIK1P39086 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
GRIK1P39086 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 AC233263.6-201ENST00000631132 1963 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GRIK1P39086 Y_RNA.222-201ENST00000364264 102 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 Y_RNA.291-201ENST00000364886 113 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 RHOT1P2-201ENST00000366423 333 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 Y_RNA.483-201ENST00000384380 101 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.33□□□□□ -1.56
GRIK1P39086 RPL37P18-201ENST00000411602 243 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIK1P39086 AL139396.1-201ENST00000421137 167 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 PIGPP3-201ENST00000425307 415 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AL606753.1-201ENST00000427435 87 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIK1P39086 MTATP6P16-201ENST00000434543 526 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 AC004980.3-201ENST00000447046 365 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AL590664.1-201ENST00000448065 339 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 IGHV5-78-201ENST00000450948 295 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 EIF4A1P11-201ENST00000451239 222 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC010683.1-201ENST00000473673 378 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.33□□□□□ -1.56
GRIK1P39086 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.33□□□□□ -1.56
GRIK1P39086 AC025465.3-201ENST00000510570 311 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC018797.3-201ENST00000513388 1241 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.33□□□□□ -1.56
GRIK1P39086 RNU7-51P-201ENST00000516560 62 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 CDH12P4-201ENST00000517835 295 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 CDH12P3-201ENST00000517935 295 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 CDH12P1-201ENST00000518435 295 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC090136.1-201ENST00000520009 240 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 CYCSP28-201ENST00000534284 321 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 LSM6P2-201ENST00000552208 177 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 IGHV3-29-201ENST00000604817 344 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC015967.1-201ENST00000619893 476 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 AC008013.2-202ENST00000637965 364 ntBASIC5.33□□□□□ -1.56
GRIK1P39086 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.33□□□□□ -1.56
GRIK1P39086 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.33□□□□□ -1.56
GRIK1P39086 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GRIK1P39086 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
GRIK1P39086 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
GRIK1P39086 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 AC007529.1-201ENST00000418574 2178 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GRIK1P39086 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 RNU6-984P-201ENST00000363236 109 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 RNA5SP391-201ENST00000363456 119 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 Y_RNA.150-201ENST00000363562 102 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 Y_RNA.210-201ENST00000364161 110 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 Y_RNA.212-201ENST00000364177 102 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 Y_RNA.461-201ENST00000384263 103 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 RNU6-146P-201ENST00000384602 108 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 MIR454-201ENST00000390180 115 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GRIK1P39086 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.32□□□□□ -1.56
GRIK1P39086 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 COX6CP13-201ENST00000428703 226 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 SNORD127-201ENST00000458892 86 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 RPS3AP41-201ENST00000462701 778 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.32□□□□□ -1.56
GRIK1P39086 MTCO3P44-201ENST00000510977 541 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC022868.1-201ENST00000517767 391 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC131281.1-201ENST00000522984 164 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIK1P39086 AC008033.2-201ENST00000542626 177 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 EDDM3DP-201ENST00000554692 434 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC125232.2-201ENST00000592457 143 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIK1P39086 AL355365.1-201ENST00000616480 294 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 AC091903.1-201ENST00000624322 454 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIK1P39086 U6.101-201ENST00000637707 76 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 AL031119.1-201ENST00000404707 1879 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIK1P39086 IRF5P1-201ENST00000504852 2164 ntBASIC5.32□□□□□ -1.56
GRIK1P39086 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GRIK1P39086 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
GRIK1P39086 AL022322.2-201ENST00000624072 20397 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms