Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SSXP9-201ENST00000417503 292 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 PPP1R11P2-201ENST00000423543 382 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RPL21P91-201ENST00000429231 479 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AL132765.1-201ENST00000434165 553 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 RPL5P7-201ENST00000444235 813 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC097463.1-201ENST00000447288 481 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AL590664.1-201ENST00000448065 339 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RN7SL254P-201ENST00000460609 284 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RPL37P6-202ENST00000464216 403 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RN7SL189P-201ENST00000468631 289 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 PPIAP19-201ENST00000486414 492 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 GZMAP1-201ENST00000503054 631 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 MTND3P25-201ENST00000509243 135 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC025465.3-201ENST00000510570 311 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 RNA5SP464-201ENST00000516251 108 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 RRN3P3-201ENST00000549207 578 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AL137100.2-201ENST00000555786 315 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC090517.1-201ENST00000569307 266 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RPL23AP87-202ENST00000573039 466 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 MIR4716-201ENST00000579628 84 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC012669.1-201ENST00000603209 283 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AC012603.1-201ENST00000606424 528 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.41□□□□□ -1.38
CLCN1P35523 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.41□□□□□ -1.38
CLCN1P35523 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN1P35523 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 RNU6-33P-201ENST00000384793 107 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 RNU6-1093P-201ENST00000391194 107 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 GCNT1P4-201ENST00000404096 329 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 RPL35AP3-201ENST00000414680 288 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 AL353662.1-201ENST00000439099 327 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 AC105399.1-202ENST00000447303 205 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 RPL7L1P1-201ENST00000448259 785 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 AC018638.3-201ENST00000461273 132 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 RNU6-1095P-201ENST00000516148 108 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 Y_RNA.687-201ENST00000516558 91 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 RNU6-570P-201ENST00000517051 105 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 AC027369.5-201ENST00000533838 755 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.4□□□□□ -1.38
CLCN1P35523 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.4□□□□□ -1.38
CLCN1P35523 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 PRPF19P1-201ENST00000584766 898 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN1P35523 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.4□□□□□ -1.38
CLCN1P35523 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN1P35523 MIR4275-201ENST00000636486 87 ntBASIC6.4□□□□□ -1.38
CLCN1P35523 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN1P35523 EOGT-210ENST00000615922 1931 ntBASIC6.4□□□□□ -1.39
CLCN1P35523 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN1P35523 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN1P35523 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN1P35523 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CLCN1P35523 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.4□□□□□ -1.39
CLCN1P35523 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN1P35523 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN1P35523 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN1P35523 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN1P35523 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN1P35523 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.39□□□□□ -1.39
CLCN1P35523 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CLCN1P35523 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN1P35523 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CLCN1P35523 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN1P35523 RNU1-35P-201ENST00000362782 153 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 RNU6-1155P-201ENST00000363554 107 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN1P35523 RNU6-398P-201ENST00000384143 109 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 Y_RNA.478-201ENST00000384358 107 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 RNU2-43P-201ENST00000410306 190 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 RPS27AP12-201ENST00000429552 465 ntBASIC6.39□□□□□ -1.39
CLCN1P35523 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms